A5023165373- Microbial Community Ecology and Physiology
- Genomics and Phylogenetic Studies
- Insect and Pesticide Research
- Methane Hydrates and Related Phenomena
- Insect and Arachnid Ecology and Behavior
- Plant and animal studies
- Marine Biology and Ecology Research
- Bacterial Genetics and Biotechnology
- Cancer Genomics and Diagnostics
- DNA and Nucleic Acid Chemistry
- Aquaculture disease management and microbiota
- RNA and protein synthesis mechanisms
- Mitochondrial Function and Pathology
- Atherosclerosis and Cardiovascular Diseases
- Marine Bivalve and Aquaculture Studies
- Advanced Proteomics Techniques and Applications
- S100 Proteins and Annexins
- Aquatic Invertebrate Ecology and Behavior
- Genetic diversity and population structure
- DNA and Biological Computing
- Advanced biosensing and bioanalysis techniques
- Socioeconomic Development in Asia
- Microfluidic and Bio-sensing Technologies
- Marine Ecology and Invasive Species
- Single-cell and spatial transcriptomics
BGI Research
2024-2025
BGI Group (China)
2024
Botswana Geoscience Institute
2024
Beijing Proteome Research Center
2017
Tianjin University
2017
Abstract Background Bivalves have independently evolved a variety of symbiotic relationships with chemosynthetic bacteria. These range from endo- to extracellular interactions, making them ideal for studies on symbiosis-related evolution. It is still unclear whether there are universal patterns symbiosis across bivalves. Here, we investigate the hologenome an thyasirid clam that represents early stages Results We present Conchocele bisecta (Bivalvia: Thyasiridae) collected deep-sea...
Systematic exploration of the hadal zone, Earth's deepest oceanic realm, has historically faced technical limitations. Here, we collected 1,648 sediment samples at 6-11 km in Mariana Trench, Yap and Philippine Basin for Trench Environment Ecology Research (MEER) project. Metagenomic 16S rRNA gene amplicon sequencing generated 92-Tbp MEER dataset, comprising 7,564 species (89.4% unreported), indicating high taxonomic novelty. Unlike reported environments, neutral drift played a minimal role,...
Elucidating cellular architecture and cell-type evolution across species is central to understanding immune system function susceptibility disease. Adaptive immunity a shared trait of the common ancestor cartilaginous bony fishes. However, evolutionary features lymphocytes in these two jawed vertebrates remain unclear. Here, we present single-cell RNA sequencing atlas cells from (white-spotted bamboo shark) (zebrafish Chinese tongue sole) Cross-species comparisons show that same cell types...
Abstract Background Metagenomic sequencing protocols are increasingly employed in research on deep-sea microbial communities for the purpose of examining their taxonomic makeup and metabolic capabilities. Despite development testing various experimental techniques, commercial kits, analytical software mock stool samples, a noticeable gap remains systematic evaluation entire procedure across range diverse habitats. Moreover, growing scale studies raises need an efficient resource-friendly...
In this study, six bacterial isolates with variable GC, including Escherichia coli as mesophilic reference strain, were selected to compare hybrid assembly strategies based on next-generation sequencing (NGS) of short reads, single-tube long-fragment reads (stLFR) sequencing, and Oxford Nanopore Technologies (ONT) platforms. We obtained the complete genomes using assembler Unicycler NGS ONT reads; others de novo assembled NGS, stLFR, by different strategies. The contiguity, accuracy,...
<title>Abstract</title> Animal behavior is associated with the gene regulatory network (GRN) coordinating expression levels in brain. The eusocial honeybees natural behavioral plasticity provide an ideal model for studying relationship between brain activity and behaviors. Here, using single-nucleus RNA sequencing spatial transcriptomics, we profile changes of 121,247 cells maturation from nursing to foraging outside. We identified 24 subpopulations cells, including Kenyon, glia, optic...
The MGIEasy UDB Universal Library Prep Set(1000022803,MGI Tech) is specifically designed for creating WGS libraries the MGI high-throughput sequencing platform series. This library prep set optimized to convert 1-1000ng of fragmented DNA into a customized library. Unique Dual barcode supported double checked split method ensuring Homogeneity and accuracy.
This method presents an optimized protocol of SDS-based DNA extraction for sediment samples. The extracted can be used metagenomic research.
This method presents an optimized protocol for the automated extraction of sediment samples and filter membranes using magnetic beads. DNA was extracted purified MGIEasy Stool Microbiome Extraction Kit (940-000122-00, MGI Tech) on a compatible automation system (MGISP-NE384, .
The MGIEasy FS DNA Library Prep Set(1000006987,MGI Tech) is specifically designed for WGS libraries construction MGI high-throughput sequencing platform series. This library prep set optimized to convert 5-400 ng genomic into a customized library. uses advanced Adapter Ligation technology and High-fidelity PCR Enzymes significantly increase yield conversion rate. applicable samples from all common animals, plants, fungus, bacteria, etc., including human, mice, rice, Arabidopsis, yeast, E....
The MGIEasy Fast FS Library Prep Set(1000006987, MGI Tech) is designed to convert genomic DNA (gDNA) into a special library for DNBSEQTMsequencers and combines the fragmentation, end-repair add A one step, simplify preparation process significantly shorten duration of preparation, reducing prep time in 2 hours. This set provides be optimized low inputs, suitable microbial sequencing, metagenomics WGS.