Emily T. Mirek

ORCID: 0000-0002-9683-8216
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About
Contact & Profiles
Research Areas
  • Endoplasmic Reticulum Stress and Disease
  • RNA regulation and disease
  • Adipose Tissue and Metabolism
  • Pancreatic function and diabetes
  • Circadian rhythm and melatonin
  • Folate and B Vitamins Research
  • Muscle metabolism and nutrition
  • RNA Research and Splicing
  • Pancreatic and Hepatic Oncology Research
  • Acute Lymphoblastic Leukemia research
  • Liver Disease Diagnosis and Treatment
  • Mitochondrial Function and Pathology
  • Fibroblast Growth Factor Research
  • Metabolomics and Mass Spectrometry Studies
  • Polyamine Metabolism and Applications
  • Biochemical Acid Research Studies
  • CRISPR and Genetic Engineering
  • Neurobiology and Insect Physiology Research
  • PI3K/AKT/mTOR signaling in cancer
  • Pancreatitis Pathology and Treatment
  • Nutrition and Health in Aging
  • Autophagy in Disease and Therapy
  • RNA and protein synthesis mechanisms
  • Diet and metabolism studies
  • Genetics, Aging, and Longevity in Model Organisms

Rutgers Sexual and Reproductive Health and Rights
2019-2025

Rutgers, The State University of New Jersey
2015-2024

Rütgers (Germany)
2022

University of Pennsylvania
2012-2014

Cancer Research Institute
2012-2014

Disturbances in protein folding and membrane compositions the endoplasmic reticulum (ER) elicit unfolded response (UPR). Each of three UPR sensory proteins-PERK (PEK/EIF2AK3), IRE1, ATF6-is activated by ER stress. PERK phosphorylation eIF2 represses global synthesis, lowering influx nascent polypeptides into stressed ER, coincident with preferential translation ATF4 (CREB2). In cultured cells, induces transcriptional expression genes directed arm UPR, including involved amino acid...

10.1091/mbc.e16-01-0039 article EN cc-by-nc-sa Molecular Biology of the Cell 2016-03-10

A stress adaptation pathway termed the integrated response has been suggested to be active in many cancers including prostate cancer (PCa). Here, we demonstrate that eIF2 kinase GCN2 is required for sustained growth androgen-sensitive and castration-resistant models of PCa both vitro vivo, patient samples. Using RNA-seq transcriptome analysis a CRISPR-based phenotypic screen, was shown regulate expression over 60 solute-carrier ( SLC ) genes, those involved amino acid transport loss function...

10.7554/elife.81083 article EN cc-by eLife 2022-09-15

Amino acid availability is sensed by GCN2 (general control nonderepressible 2) and mechanistic target of rapamycin complex 1 (mTORC1), but how these two sensors coordinate their respective signal transduction events remains mysterious. In this study we utilized mouse genetic models to investigate the role in hepatic mTORC1 regulation upon amino stress induced a single injection asparaginase. We found that deletion Gcn2 prevented phosphorylation eukaryotic initiation factor 2α asparaginase...

10.1074/jbc.ra117.001625 article EN cc-by Journal of Biological Chemistry 2018-02-15

Abstract Appropriate regulation of the Integrated stress response (ISR) and mTORC1 signaling are central for cell adaptation to starvation amino acids. Halofuginone (HF) is a potent inhibitor aminoacylation tRNAPro with broad biomedical applications. Here, we show that in addition translational control directed by activation ISR general nonderepressible 2 (GCN2), HF increased free acids translation genes involved protein biogenesis via sustained signaling. Deletion GCN2 reduced survival...

10.1093/nar/gkab362 article EN cc-by-nc Nucleic Acids Research 2021-04-24

Macroautophagy (autophagy hereafter) captures intracellular components and delivers them to lysosomes for degradation recycling 1 . In adult mice, autophagy sustains metabolism prevent wasting by cachexia survive fasting, also suppresses inflammation, liver steatosis, neurodegeneration, lethality 2,3 Defects in contribute metabolic, inflammatory degenerative diseases, however, the specific mechanisms involved were unclear 4 Here we profiled inflammation mice with conditional, whole-body...

10.1101/2025.02.20.638910 preprint EN public-domain bioRxiv (Cold Spring Harbor Laboratory) 2025-02-24

The antileukemic agent asparaginase triggers the amino acid response (AAR) in liver by activating eukaryotic initiation factor 2 (eIF2) kinase general control nonderepressible (GCN2). To explore mechanism which AAR induction is necessary to mitigate hepatic lipid accumulation and prevent dysfunction during continued treatment, wild-type Gcn2 null mice were injected once daily with or phosphate buffered saline for up 14 days. Asparaginase induced mRNA expression of multiple genes greatly...

10.1152/ajpendo.00361.2014 article EN AJP Endocrinology and Metabolism 2014-12-10

Dietary sulfur amino acid restriction (SAAR) improves body composition and metabolic health across several model organisms in part through induction of the integrated stress response (ISR). We investigate hypothesis that activating transcription factor 4 (ATF4) acts as a converging point ISR during SAAR. Using liver-specific or global gene ablation strategies, both female male mice, we address role ATF4 dietary show is dispensable chronic hepatokine fibroblast growth 21 while being essential...

10.1093/jn/nxaa396 article EN cc-by-nc Journal of Nutrition 2020-12-04

The athletic horse, despite being over 50% muscle mass, remains understudied with regard to the effects of exercise and training on skeletal metabolism. To begin address this knowledge gap, we employed an untargeted metabolomics approach characterize exercise-induced fitness-related changes in eight unconditioned Standardbred horses (four male, four female) before after a 12-week period. Before training, showed high degree individual variation metabolome, resulting very few differences...

10.3389/fphys.2020.00110 article EN cc-by Frontiers in Physiology 2020-02-18

The anti-leukemic agent asparaginase activates the integrated stress response (ISR) kinase GCN2 and inhibits signaling via mechanistic target of rapamycin complex 1 (mTORC1). study objective was to investigate protective role activating transcription factor 4 (ATF4) in controlling hepatic transcriptome mediating GCN2-mTORC1 during asparaginase. We compared global gene expression patterns livers from wildtype, Gcn2 -/-, Atf4 -/- mice treated with or excipient further explored selected...

10.1038/s41598-017-01041-7 article EN cc-by Scientific Reports 2017-04-24

Phytoecdysteroids such as 20-hydroxyecdysone (20HE) are nutritional supplements marketed enhancers of lean body mass. In this study the impact 20HE ingestion on protein kinase B/Akt-mechanistic target rapamycin complex 1 signaling in skeletal muscle and liver male rats was found to be limited. Bioavailability 20HE, whether consumed alone or with leucine, also remained low at all doses ingested. Additional work is necessary clarify mechanism action vivo.

10.1139/apnm-2015-0301 article EN Applied Physiology Nutrition and Metabolism 2015-09-17

Abstract Dietary removal of an essential amino acid (EAA) triggers the integrated stress response (ISR) in liver. Herein, we explored mechanisms that activate ISR and execute changes transcription translation according to missing EAA. Wild‐type mice lacking general control nonderepressible 2 ( Gcn2 ) were fed complete diet or a devoid either leucine sulfur acids (methionine cysteine). Serum liver concentrations significantly reduced within first 6 h feeding leucine, corresponding with...

10.1096/fj.202200204rr article EN The FASEB Journal 2022-06-12

Treatment with the antileukemic agent asparaginase can induce acute pancreatitis, but pathophysiology remains obscure. In liver of mice, eukaryotic initiation factor 2 (eIF2) kinase general control nonderepressible (GCN2) is essential for mitigating metabolic stress caused by asparaginase. We determined consequences treatment on pancreata wild-type (WT, GCN2-intact) and GCN2-deleted (ΔGcn2) mice. Mean pancreas weights in ΔGcn2 mice treated 8 days were increased (P < 0.05) above all other...

10.1152/ajpgi.00052.2016 article EN AJP Gastrointestinal and Liver Physiology 2016-03-12

The circadian clock and aging are intertwined. Disruption to the normal diurnal rhythm accelerates corresponds with telomere shortening. Telomere attrition also correlates increase cellular senescence incidence of chronic disease. In this report, we examined association White Collar 2 (WC-2) in Neurospora BMAL1 zebrafish mice found that these transcription factors associate DNA a rhythmic fashion. We identified Telomeric Repeat-containing RNA (TERRA), lncRNA transcribed from telomere. TERRA...

10.1371/journal.pone.0223803 article EN cc-by PLoS ONE 2019-10-21

This paper details the discovery that GCN2 activation is required in both male and female mice to maintain core body temperature during acute cold exposure. The results point a novel role for supporting adaptive thermogenesis via amino acid transport actomyosin mechanics brown adipose tissue.

10.1152/ajpendo.00181.2023 article EN cc-by AJP Endocrinology and Metabolism 2023-10-04

Abstract The activation of branched chain amino acid (BCAA) catabolism has garnered interest as a potential therapeutic approach to improve insulin sensitivity, enhance recovery from heart failure, and blunt tumor growth. Evidence for this relies in part on BT2, small molecule that promotes BCAA oxidation is protective mouse models these pathologies. BT2 other analogs allosterically inhibit ketoacid dehydrogenase kinase (BCKDK) promote oxidation, which presumed underlie the salutary effects...

10.1101/2024.03.05.582974 preprint EN cc-by-nc bioRxiv (Cold Spring Harbor Laboratory) 2024-03-11

Abstract Dietary sulfur amino acid restriction (SAAR) protects against diet-induced obesity, extends healthspan, and coincides with an overall reduction in hepatic protein synthesis. To explore the underpinnings of SAAR-induced slowed growth its impact on liver metabolism proteostasis, we resolved changes mRNA abundances compared synthesis rates individual proteins. achieve this, adult male mice were provided deuterium-labeled drinking water while freely consuming either a regular-fat or...

10.1007/s11357-023-00758-w article EN cc-by GeroScience 2023-03-28

Asparaginase is an amino acid-depleting agent used to treat blood cancers. Metabolic complications due asparaginase affect liver function in humans. To examine how the response changes during maturity adulthood, here we treated juvenile (2-week), young adult (8-week), and mature (16-week) mice with drug or excipient for 1 week conducted RNA-Seq functional analyses. reduced body growth mass juveniles but not animals. Unbiased exploration of effect on transcriptome revealed that integrated...

10.1074/jbc.ra119.009864 article EN cc-by Journal of Biological Chemistry 2019-08-15

Abstract A stress adaptation pathway termed the integrated response has been suggested to be active in many cancers including prostate cancer (PCa). Here, we demonstrate that eIF2 kinase GCN2 is required for sustained growth androgen-sensitive and castration-resistant models of PCa both vitro vivo, patient samples. Using RNA-seq transcriptome analysis a CRISPR-based phenotypic screen, was shown regulate expression over 60 solute-carrier ( SLC ) genes, those involved amino acid transport loss...

10.1101/2022.06.17.496598 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2022-06-18

Disruptions in biological rhythms are associated with the development of metabolic diseases. General control nonderepressible 2 (GCN2), a primary sensor amino acid insuffciency and activator integrated stress response (ISR), plays an integral role liver metabolism. The objective this work was to examine impact feeding low protein quality (LPQ) diet on diurnal We hypothesized that activation ISR by GCN2 maintains within during LPQ feeding. To address our objective, wild type (WT) whole body...

10.1152/physiol.2024.39.s1.2010 article EN Physiology 2024-05-01

Disruptions in circadian rhythms are associated with an increased risk of developing metabolic diseases. General control nonderepressible 2 (GCN2), a primary sensor amino acid insufficiency and activator the integrated stress response (ISR), has emerged as conserved regulator clock multiple organisms. The objective this study was to examine diurnal patterns hepatic ISR activation liver whole body metabolism. We hypothesized that GCN2 cues signaling over natural 24-h feeding-fasting cycle. To...

10.1152/ajpendo.00129.2024 article EN AJP Endocrinology and Metabolism 2024-08-28
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