Adriano Abbud

ORCID: 0000-0003-1685-0619
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Research Areas
  • SARS-CoV-2 and COVID-19 Research
  • Mosquito-borne diseases and control
  • Marine Biology and Ecology Research
  • Bacillus and Francisella bacterial research
  • Viral Infections and Outbreaks Research
  • SARS-CoV-2 detection and testing
  • Viral Infections and Vectors
  • Poxvirus research and outbreaks
  • COVID-19 epidemiological studies
  • Virology and Viral Diseases
  • Crustacean biology and ecology
  • COVID-19 Clinical Research Studies
  • Collembola Taxonomy and Ecology Studies
  • COVID-19 diagnosis using AI
  • vaccines and immunoinformatics approaches
  • Phytoplasmas and Hemiptera pathogens
  • Healthcare Regulation
  • Coral and Marine Ecosystems Studies
  • Animal Virus Infections Studies
  • HIV Research and Treatment
  • Healthcare during COVID-19 Pandemic
  • Parasite Biology and Host Interactions
  • Malaria Research and Control
  • Herpesvirus Infections and Treatments
  • Geography and Environmental Studies

Instituto Adolfo Lutz
2021-2024

Secretaria da Saúde
2022

Universidade de São Paulo
2009

Arthropod-borne viruses (arboviruses) are transmitted by arthropod vectors to humans, leading disease outbreaks mainly in tropical regions of the world.1Weaver SC Charlier C Vasilakis N Lecuit M Zika, chikungunya, and other emerging vector-borne viral diseases.Annu Rev Med. 2018; 69: 395-408Crossref PubMed Scopus (234) Google Scholar Although many arboviruses known, three Aedes-spp-borne particularly concerning for humans at a global scale due recurring large expanding epidemic dengue virus,...

10.1016/s2214-109x(23)00325-x article EN cc-by The Lancet Global Health 2023-08-01
Tiago Gräf Alexander A. Martínez Gonzalo Bello Simon Dellicour Philippe Lemey and 82 more Vittoria Colizza Mattia Mazzoli Chiara Poletto Vanessa Leiko Oikawa Cardoso Alexandre Freitas da Silva Elsa Baumeister Josefina Campos Andrea Pontoriero Indira Martin Kirvina Ferguson Draven Johnson Songee Beckles Kasandra Forde Aldo Sosa Roberto I. Meléndez Roxana Loayza Cinthia Avila E. Fernández Carol Jessica Guzman Otazo Marilda Mendonça Siqueira Fernando Couto Motta Katia Corrêa de Oliveira Santos Adriano Abbud Mirleide Cordeiro dos Santos Jessylene de Almeida Ferreira Rodrigo Fasce Jorge Fernandes Sergio Rangel Marcela Mercado Dioselina Peláez Claudio Soto-Garita Estela Cordero-Laurent Francisco Duarte-Martínez Hebleen Brenes Isaac Miguel Sánchez Yvonne Imbert Alfredo Bruno Domenica Joseth de Mora Coloma Dalia Xochitl Sandoval López Denis Gerson Jovel Alvarado Deny Lisset Martínez Morán Claudia Pacheco Linda Mendoza Joyce Whyte-Chin Mustapha Abdul-Kadir Jacques Boncy Ito Journel Mitzi Castro Paz Sofía Carolina Alvarado Soany Avilez Michelle Brown Caludia Elena Wong Arambula José Ernesto Ramírez–González Alexander A. Martínez C.M. González Brechla Moreno Arévalo Danilo Franco Sandra López‐Vergès Juan Miguel Pascale Cynthia Vázquez Sandra González Nancy Rojas Carlos Padilla Phyllis S Pinas Navienda Asebeh Christine V. F. Carrington Nikita Sahadeo Héctor Chiparelli Natalia Goñi Lieska Rodríguez Pierina D’Angelo Fernando Couto Motta Paola Cristina Resende Marilda Mendonça Siqueira Leticia Franco Lionel Gresh Jean-Marc Gabastou Angel Rodríguez Andrea Vicari Sylvain Aldighieri Jairo Méndez‐Rico Juliana Almeida Leite

Abstract Latin America and Caribbean (LAC) regions were an important epicenter of the COVID-19 pandemic SARS-CoV-2 evolution. Through Genomic Surveillance Regional Network (COVIGEN), LAC countries produced number genomic sequencing data that made possible enhanced surveillance capacity in Americas, paving way for characterization emerging variants helping to guide public health response. In this study we analyzed approximately 300,000 sequences generated between February 2020 March 2022 by...

10.1038/s41467-024-46143-9 article EN cc-by Nature Communications 2024-02-28

Mutations at both the receptor-binding domain (RBD) and amino (N)-terminal (NTD) of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Spike (S) glycoprotein can alter its antigenicity promote immune escape. We identified that SARS-CoV-2 lineages circulating in Brazil with mutations concern RBD independently acquired convergent deletions insertions NTD S protein, which altered antigenic-supersite other predicted epitopes this region. Importantly, we detected community transmission...

10.1093/ve/veab069 article EN cc-by Virus Evolution 2021-08-05
Ighor Arantes Felipe Gomes Naveca Tiago Gräf Fábio Miyajima Helisson Faoro and 95 more Gabriel Luz Wallau Edson Delatorre Luciana Appolinario Elisa Cavalcante Pereira Tainá Moreira Martins Venas Alice Sampaio Barreto da Rocha Renata Serrano Lopes Marilda Mendonça Siqueira Gonzalo Bello Paola Cristina Resende Carlos Leonardo Araújo Cleber Furtado Akesenen Fernando Braga Stehling Dias Igor Oliveira Duarte Jamille Mendes Bezerra Joaquim Cesar Sousa Pedro Miguel Carneiro Jerônimo Suzana Almeida Porto Thaís de Oliveira Costa Thais Ferreira de Oliveira Ticiane Cavalcante de Souza Veridiana Pessoa Miyajima Acacia Lourenço Francisco Nasr Ana Carolina De la Vechia Rosana Aparecida Piler Tatiane Motta Huggler Cristiano Fernandes Marcelo Ferreira da Costa Gomes Adriano Abbud Katia Oliveira Correa Alexandre Freitas da Silva Antônio Marinho da Silva Neto Cássia Docena Filipe Zimmer Dezordi Gustavo Barbosa de Lima Laís Ceschini Machado Lílian Caroliny Amorim Silva Marcelo Henrique Santos Paiva Matheus Filgueira Bezerra Raul Emídio de Lima Andréia Akemi Suzukawa Mauro de Medeiros Oliveira Michelle Orane Schemberger Beatriz Grinsztejn Patrícia Brasil Valdiléa G. Veloso Felicidade Mota Pereira Dalane Loudal Florentino Teixeira Haline Barroso Anderson Brandão Leite Vinicius Lemes da Silva André Felipe Leal Bernardes Felipe Campos de Melo Iani Irina Nastassja Riediger Maria do Carmo Debur Themis Rocha Andreia Santos Costa Lindomar dos Anjos Silva Tirza Mattos Ana Barjud Marques Maximo Liana Perdigão Mello Vânia Angelica Feitosa Viana Rodrigo Ribeiro Rodrigues Darcita Büerger Rovaris Sandra Bianchini Fernandes Lídio Gonçãlves Lima Neto Valnete Andrade Andréa Cony Cavalcanti Richard Steiner Salvato Tatiana Schäffer Gregianini Jucimária Dantas Galvão Ágatha Costa André de Lima Guerra Corado Fernanda Nascimento George Silva Karina Pessoa Luciana Fé Gonçalves Maria Júlia Brandão Matilde Mejía Michele Silva de Jesus Valdinete Alves do Nascimento Victor Costa de Souza Bruna Mendonça da Silva Fernando Couto Motta Jéssica de Macedo Carvalho Larissa Macedo Pinto Fernando Vinhal Isabela de Lucena Heráclio Morgana de Freitas Caraciolo Roberta Mendes Abreu Silva Silvio Rodrigues de Almeida Thayna Karoline Sousa Silva Alessandro Álvares Magalhães Érika Lopes Rocha Batista Greice Madeleine Ikeda do Carmo Janaína Sallas Walquíria Aparecida Ferreira de Almeida

The SARS-CoV-2 variant of concern (VOC) Delta was first detected in India October 2020. imported cases the Brazil were identified April 2021 southern region, followed by more different regions during following months. By early September 2021, already dominant southeastern (87%), (73%), and northeastern (52%) Brazilian regions. This study aimed to understand spatiotemporal dissemination dynamics Brazil. To this end, we employed a combination maximum likelihood (ML) Bayesian methods...

10.1128/spectrum.02641-21 article EN cc-by Microbiology Spectrum 2022-08-24

COVID-19 vaccination began in São Paulo, Brazil January 2021, first targeting healthcare workers (HCWs) and the elderly, using CoronaVac vaccine (Sinovac/Butantan) subsequently Oxford/AstraZeneca (ChAdOx1) (AstraZeneca/FIOCRUZ-RJ). Studies on such vaccines have shown efficacy preventing severe cases deaths, but there is a lack of information regarding their effectiveness. This manuscript presents data from Instituto Adolfo Lutz (IAL), public health laboratory located Paulo City that receives...

10.26633/rpsp.2021.126 article EN cc-by-nc-nd Revista Panamericana de Salud Pública 2021-10-25

Abstract Mutations at both the receptor-binding domain (RBD) and amino (N)-terminal (NTD) of SARS-CoV-2 Spike (S) glycoprotein can alter its antigenicity promote immune escape. We identified that lineages circulating in Brazil with mutations concern RBD independently acquired convergent deletions insertions NTD S protein, which altered antigenic-supersite other predicted epitopes this region. Importantly, we detected communitary transmission four bearing indels: a P.1 Δ69-70 lineage (which...

10.1101/2021.03.19.21253946 preprint EN cc-by medRxiv (Cold Spring Harbor Laboratory) 2021-03-20

Mpox is caused by a zoonotic orthopoxvirus capable of infecting several animal species, including humans. The analysis cases in the current outbreak showed that, differently from what happens classical disease, mpox has mostly affected men who have sex with (MSM) and bisexuals, high proportion people living HIV/AIDS. role immune system fighting been discussed literature experts believe that immunity conferred natural infection may be lifelong, advocating against possibility reinfection...

10.1089/aid.2022.0189 article EN AIDS Research and Human Retroviruses 2023-05-04

Recombination events have been described in the Coronaviridae family. Since beginning of SARS-CoV-2 pandemic, a variable degree selection pressure has acted upon virus, generating new strains with increased fitness terms viral transmission and antibody scape. Most SC2 variants concern (VOC) detected so far carry combination key amino acid changes indels. may also reshuffle existing genetic profiles distinct strains, potentially giving origin to recombinant altered phenotypes. However,...

10.3389/fmed.2022.1008600 article EN cc-by Frontiers in Medicine 2022-09-28

New-generation sequencing (NGS) techniques have brought the opportunity for genomic monitoring of several microorganisms potentially relevant to public health. The establishment different methods with mechanisms provides a wide choice, taking into account aspects. With that in mind, present aim study was compare basic metrics could impact genotyping by nanopores from Oxford Nanopore Technologies and synthesis Illumina clinical samples positive Chikungunya (CHIKV). Among studied, running...

10.1186/s43141-023-00536-3 article EN cc-by Journal of Genetic Engineering and Biotechnology 2023-08-29

Genomics can bring valuable information for tracking transmission and evolution of pathogens, COVID-19 is showing that it a tool rapid response to overcome the SARS-CoV-2.1Lo SW Jamrozy D. epidemiological surveillance.Nat Rev Microbiol. 2020; 18: 478Crossref PubMed Scopus (23) Google Scholar By end August 2021, more than 3·1 million sequences have been shared through Global Initiative on Sharing Avian Influenza Data (GISAID), in an effort towards open data sharing.2Shu Y McCauley J. GISAID:...

10.1016/j.lana.2021.100095 article EN cc-by-nc-nd The Lancet Regional Health - Americas 2021-11-18

Chikungunya virus (CHIKV), a mosquito-borne alphavirus, has traditionally circulated in Africa and Asia, causing human febrile illness accompanied by severe, chronic joint pain. The Asian East-Central-South African (ECSA) genotypes were introduced Brazil 2014, Bahia State Northeast region. CHIKV rapidly spread, epidemics urban areas, the ECSA genotype was detected also other regions. In last five years, more than 700,000 cases of fever reported Brazil. Nevertheless, there is limited...

10.1016/j.jcvp.2022.100070 article EN cc-by-nc-nd Journal of Clinical Virology Plus 2022-02-27

Three new species of serpulids from Brazil are described herein, two which were described, but not named, by Zibrowius here considered as and given specific names. Vermiliopsis zibrowii sp. nov. is characterized an operculum with a single endplate or several septa progressively nearer to each other towards the tip separated conspicuous ribs. Pseudovermilia harryi has short ribs its tube different similar congeners. Filogranula revizee sunken funnel and, frequently, slender, distally sharp...

10.11646/zoosymposia.2.1.16 article EN Zoosymposia 2009-08-31
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