Henna Gadhavi

ORCID: 0009-0007-8317-9729
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About
Contact & Profiles
Research Areas
  • Metabolomics and Mass Spectrometry Studies
  • Genomics and Phylogenetic Studies
  • Gut microbiota and health

The Francis Crick Institute
2023-2024

King's College London
2023

Simone Zuffa Robin Schmid Anelize Bauermeister Paulo Wender Portal Gomes Andrés Mauricio Caraballo‐Rodríguez and 95 more Yasin El Abiead Allegra T. Aron Emily C. Gentry Jasmine Zemlin Michael J. Meehan Nicole E. Avalon Robert H. Cichewicz Ekaterina Buzun Marvic Carrillo Terrazas Chia-Yun Hsu Renee E. Oles Adriana Vasquez Ayala Jiaqi Zhao Hiutung Chu Mirte C. M. Kuijpers Sara L. Jackrel Fidele Tugizimana Lerato Nephali Ian A. Dubery Ntakadzeni E. Madala Eduarda Antunes Moreira Letícia V. Costa‐Lotufo Norberto Peporine Lopes Paula Rezende‐Teixeira Paula C. Jimenez Bipin Rimal Andrew D. Patterson Matthew F. Traxler Rita de Cássia Pessotti Daniel Alvarado-Villalobos Giselle Tamayo‐Castillo Priscila Chaverrí Efraín Escudero‐Leyva Luis-Manuel Quirós-Guerrero Alexandre Bory Juliette Joubert Adriano Rutz Jean‐Luc Wolfender Pierre‐Marie Allard Andreas Sichert Sammy Pontrelli Benjamin Pullman Nuno Bandeira William H. Gerwick Katia Gindro Josep Massana‐Codina Berenike Wagner Karl Forchhammer Daniel Petras Nicole Aiosa Neha Garg Manuel Liebeke Patric Bourceau Kyo Bin Kang Henna Gadhavi Luiz Pedro S. de Carvalho Mariana Silva dos Santos Alicia Isabel Pérez‐Lorente Carlos Molina‐Santiago Diego Romero Raimo Franke Mark Brönstrup Arturo Vera Ponce de León Phillip B. Pope Sabina Leanti La Rosa Giorgia La Barbera Henrik M. Roager Martin Frederik Laursen Fabian Hammerle Bianka Siewert Ursula Peintner Cuauhtémoc Licona‐Cassani Lorena Rodríguez-Orduña Evelyn Rampler Felina Hildebrand Gunda Koellensperger Harald Schoeny Katharina Hohenwallner Lisa Panzenboeck Rachel Gregor Ellis C. O’Neill Eve Tallulah Roxborough Jane Odoi Nicole J. Bale Su Ding Jaap S. Sinninghe Damsté Xue Li Guan Jerry Cui Kou‐San Ju Denise Brentan Silva Fernanda Motta Ribeiro Silva Gilvan Ferreira da Silva Héctor H. F. Koolen Carlismari O. Grundmann Jason A. Clement

Abstract microbeMASST, a taxonomically informed mass spectrometry (MS) search tool, tackles limited microbial metabolite annotation in untargeted metabolomics experiments. Leveraging curated database of >60,000 monocultures, users can known and unknown MS/MS spectra link them to their respective producers via fragmentation patterns. Identification microbe-derived metabolites relative without priori knowledge will vastly enhance the understanding microorganisms’ role ecology human health.

10.1038/s41564-023-01575-9 article EN cc-by Nature Microbiology 2024-02-05
Simone Zuffa Robin Schmid Anelize Bauermeister Paulo Wender Portal Gomes Andrés Mauricio Caraballo‐Rodríguez and 95 more Yasin El Abiead Allegra T. Aron Emily C. Gentry Jasmine Zemlin Michael J. Meehan Nicole E. Avalon Robert H. Cichewicz Ekaterina Buzun Marvic Carrillo Terrazas Chia-Yun Hsu Renee E. Oles Adriana Vasquez Ayala Jiaqi Zhao Hiutung Chu Mirte C. M. Kuijpers Sara L. Jackrel Fidele Tugizimana Lerato Nephali Ian A. Dubery Ntakadzeni E. Madala Eduarda Antunes Moreira Letícia V. Costa‐Lotufo Norberto Peporine Lopes Paula Rezende‐Teixeira Paula C. Jimenez Bipin Rimal Andrew D. Patterson Matthew F. Traxler Rita de Cássia Pessotti Daniel Alvarado-Villalobos Giselle Tamayo‐Castillo Priscila Chaverrí Efraín Escudero‐Leyva Luis-Manuel Quirós-Guerrero Alexandre Bory Juliette Joubert Adriano Rutz Jean‐Luc Wolfender Pierre‐Marie Allard Andreas Sichert Sammy Pontrelli Benjamin Pullman Nuno Bandeira William H. Gerwick Katia Gindro Josep Massana‐Codina Berenike Wagner Karl Forchhammer Daniel Petras Nicole Aiosa Neha Garg Manuel Liebeke Patric Bourceau Kyo Bin Kang Henna Gadhavi Luiz Pedro S. de Carvalho Mariana Silva dos Santos Alicia Isabel Pérez‐Lorente Carlos Molina‐Santiago Diego Romero Raimo Franke Mark Brönstrup Arturo Vera-Ponce León Phillip B. Pope Sabina Leanti La Rosa Giorgia La Barbera Henrik M. Roager Martin Frederik Laursen Fabian Hammerle Bianka Siewert Ursula Peintner Cuauhtémoc Licona‐Cassani Lorena Rodriguez-Orduña Evelyn Rampler Felina Hildebrand Gunda Koellensperger Harald Schoeny Katharina Hohenwallner Lisa Panzenboeck Rachel Gregor Ellis C. O’Neill Eve Tallulah Roxborough Jane Odoi Nicole J. Bale Su Ding Jaap S. Sinninghe Damsté Xue Li Guan Jerry Cui Kou‐San Ju Denise Brentan Silva Fernanda Motta Ribeiro Silva Gilvan Ferreira da Silva Héctor H. F. Koolen Carlismari O. Grundmann Jason A. Clement

Abstract MicrobeMASST, a taxonomically-informed mass spectrometry (MS) search tool, tackles limited microbial metabolite annotation in untargeted metabolomics experiments. Leveraging curated database of >60,000 monocultures, users can known and unknown MS/MS spectra link them to their respective producers via fragmentation patterns. Identification microbial-derived metabolites relative producers, without priori knowledge, will vastly enhance the understanding microorganisms’ role ecology...

10.1101/2023.07.20.549584 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2023-07-20
Simone Zuffa Robin Schmid Anelize Bauermeister Paulo Wender Portal Gomes Andrés Mauricio Caraballo‐Rodríguez and 95 more Yasin El Abiead Allegra T. Aron Emily C. Gentry Jasmine Zemlin Michael J. Meehan Nicole E. Avalon Robert H. Cichewicz Ekaterina Buzun Marvic Carrillo Terrazas Chia-Yun Hsu Renee E. Oles Adriana Vasquez Ayala Jiaqi Zhao Hiutung Chu Mirte C. M. Kuijpers Sara L Jackrel Fidele Tugizimana Lerato Nephali Ian A. Dubery Ntakadzeni E. Madala Eduarda Antunes Moreira Leticia Veras Costa-Lotufo Norberto Peporine Lopes Paula Rezende-Teixeira Paula C. Jimenez Bipin Rimal Andrew D. Patterson Matthew F. Traxler Rita de Cássia Pessotti Daniel Alvarado-Villalobos Giselle Tamayo‐Castillo Priscila Chaverri Efraín Escudero‐Leyva Luis-Manuel Quirós-Guerrero Alexandre Bory Juliette Joubert Adriano Rutz Jean-Luc Wolfender Pierre‐Marie Allard Andreas Sichert Sammy Pontrelli Benjamin Pullman Nuno Bandeira William H. Gerwick Katia Gindro Josep Massana‐Codina Berenike Wagner Karl Forchhammer Daniel Petras Nicole Aiosa Neha Garg Manuel Liebeke Patric Bourceau Kyo Bin Kang Henna Gadhavi Luiz Pedro S. de Carvalho Mariana Silva dos Santos Alicia Isabel Pérez‐Lorente Carlos Molina‐Santiago Diego Romero Raimo Franke Mark Brönstrup Arturo Vera-Ponce León Phillip B. Pope Sabina Leanti La Rosa Giorgia La Barbera Henrik M. Roager Martin Frederik Laursen Fabian Hammerle Bianka Siewert Ursula Peintner Cuauhtémoc Licona-Cassani Lorena Rodríguez-Orduña Evelyn Rampler Felina Hildebrand Gunda Koellensperger Harald Schoeny Katharina Hohenwallner Lisa Panzenboeck Rachel Gregor Ellis Charles O'Neill Eve Tallulah Roxborough Jane Odoi Nicole J. Bale Su Ding Jaap S. Sinninghe Damsté Xue Li Guan Jerry Cui Kou‐San Ju Denise Brentan Silva Fernanda Motta Ribeiro Silva Gilvan Ferreira da Silva Hector H F Koolen Carlismari O. Grundmann Jason A. Clement

Abstract MicrobeMASST, a taxonomically-informed mass spectrometry (MS) search tool, tackles limited microbial metabolite annotation in untargeted metabolomics experiments. Leveraging curated database of >60,000 monocultures, users can known and unknown MS/MS spectra link them to their respective producers via fragmentation patterns. Identification microbial-derived metabolites relative producers, without priori knowledge, will vastly enhance the understanding microorganisms' role ecology...

10.21203/rs.3.rs-3189768/v1 preprint EN cc-by Research Square (Research Square) 2023-08-03
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