Amit Kumar

ORCID: 0000-0002-3079-2067
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About
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Research Areas
  • Hippo pathway signaling and YAP/TAZ
  • CRISPR and Genetic Engineering
  • Plant biochemistry and biosynthesis
  • Sarcoma Diagnosis and Treatment
  • CAR-T cell therapy research
  • Oral and Maxillofacial Pathology
  • Anesthesia and Sedative Agents
  • Viral-associated cancers and disorders
  • Cytomegalovirus and herpesvirus research
  • Tumors and Oncological Cases
  • Virus-based gene therapy research
  • Prostate Cancer Treatment and Research
  • Phytochemicals and Medicinal Plants
  • Immune Cell Function and Interaction
  • Veterinary Pharmacology and Anesthesia
  • Bone Tumor Diagnosis and Treatments
  • Plant tissue culture and regeneration
  • Diet and metabolism studies
  • Single-cell and spatial transcriptomics
  • Systemic Lupus Erythematosus Research
  • PI3K/AKT/mTOR signaling in cancer
  • Drug-Induced Hepatotoxicity and Protection
  • Transgenic Plants and Applications
  • Alzheimer's disease research and treatments
  • RNA modifications and cancer

Indian Institute of Integrative Medicine
2017-2025

Malaviya National Institute of Technology Jaipur
2025

All India Institute of Medical Sciences
2022-2024

Virginia Commonwealth University
2021-2024

Teerthanker Mahaveer University
2024

Chaudhary Sarwan Kumar Himachal Pradesh Krishi Vishvavidyalaya
2014-2024

Rajasthan University of Veterinary and Animal Sciences
2023-2024

Johns Hopkins Medicine
2018-2023

Johns Hopkins University
2018-2023

Sanjay Gandhi Post Graduate Institute of Medical Sciences
2022-2023

Lysine acetylation is a posttranslational modification that dynamically regulated by the activity of acetyltransferases and deacetylases. The human mouse genomes encode 18 different lysine deacetylases (KDACs) which are key regulators many cellular processes. Identifying substrates KDACs pinpointing sites on target proteins may provide important information about molecular basis their functions. Here we apply quantitative proteomics to identify endogenous mitochondrial deacetylase Sirtuin 3...

10.1371/journal.pone.0050545 article EN cc-by PLoS ONE 2012-12-07

Crocus sativus is the only plant species which produces apocarotenoids like crocin, picrocrocin and safranal in significant amounts. These compounds impart organoleptic properties to saffron (dried stigmas of flower) making it world's costliest spice. have tremendous medicinal as well. Effect endophytes on apocarotenoid production molecular mechanism involved has not been reported so far. Here we studied effect an oleaginous fungal endophyte, Mortierella alpina CS10E4 growth, metabolism...

10.1038/s41598-017-08974-z article EN cc-by Scientific Reports 2017-08-11

Significance Regulatory T cells (Tregs) infiltrate tumors in various cancers and promote an immunosuppressive microenvironment that hinders antitumor immunity. Denileukin diftitox, a diphtheria-toxin–based fusion protein depletes Tregs, was approved for the treatment of cell malignancies, but its clinical use limited due to presence aggregates toxicity associated with vascular leakage. Here, we report production second-generation IL-2 receptor-targeted, fully-folded, monomeric diphtheria...

10.1073/pnas.1815087116 article EN Proceedings of the National Academy of Sciences 2019-02-04

Cells have evolved their communication methods to sense microenvironments and send biological signals. In addition using ligands receptors, cells use diverse channels including gap junctions communicate with immediate neighbors. Current approaches, however, cannot effectively capture the influence of various microenvironments. Here, we propose a novel approach investigate cell neighbor-dependent gene expression (CellNeighborEX) in spatial transcriptomics (ST) data. To categorize based on...

10.15252/msb.202311670 article EN cc-by Molecular Systems Biology 2023-10-10

Selected medicinal plants possess many phytochemicals that have excellent antioxidant and anti-cell proliferation potential. The banana stem extract (BSE) is also one among them which therapeutic values. objective of the current experiment was to identify confirm activity using suitable validated in-vitro experiments. Banana prepared by traditional extraction method. presence various classes were confirmed qualitative phytochemical screening tests a standard protocol. BSE subjected cell...

10.13005/ojc/400602 article EN Oriental Journal Of Chemistry 2025-01-03

The present work employs the CCSD(T)/CBS//M06-2X/aug-cc-pVTZ level of theory to investigate effect a water monomer (WM) and dimer (WD) on oxidation nitrous acid (HONO) by Criegee intermediate (CH 2 OO).

10.1039/d4cp04117h article EN Physical Chemistry Chemical Physics 2025-01-01

Abstract The wonder drug artemisinin, a sesquiterpene lactone endoperoxide from Artemisia annua is the million‐dollar molecule required to curb deadliest disease, Malaria. One of major challenges even today increase concentration artemisinin within plants. transcription factors are important regulators plant secondary metabolites and have potential regulate key steps or whole biosynthetic pathway. In this study, we identified characterised two bHLH ( Aa6119 Aa7162 ) A. . Both turned out be...

10.1111/ppl.13849 article EN Physiologia Plantarum 2023-01-01
Esha Madan Antonio Palma Vignesh Vudatha Amit Kumar Praveen Bhoopathi and 95 more Jochen Wilhelm Tytus Bernaś Patrick Martin Gaurav Bilolikar Apoorva Gogna Maria Leonor Peixoto Isabelle Dreier Thaís Fenz Araujo Elena Garré Anna Gustafsson Kalpana Deepa Priya Dorayappan Narsimha Mamidi Zhaoyu Sun Michail Yekelchyk Davide Accardi Amalie Lykke Olsen Lin Lin Asaf Ashkenazy Titelman Michael Bianchi Phil Jessmon Elnaz Abbasi Farid Anjan K. Pradhan Lena Neufeld Eilam Yeini Santanu Maji Christopher J. Pelham Hyobin Kim Daniel S. Oh Hans O. Rolfsnes Rita Canas‐Marques Amy Lu Masaki Nagane Sahil Chaudhary Kartik Gupta Keshav C. Gogna Ana Bigio Karthikeya Bhoopathi Padmanabhan Mannangatti K. Gopinath Achary Mohd Javed Akhtar Sara Belião Swadesh K. Das Isabel Correia Cláudia L. da Silva Arsénio M. Fialho Michael J. Poellmann Kaila Javius-Jones Adam M. Hawkridge Subhash Pal Kumari S. Shree Emad A. Rakha Sambhav Khurana Gaoping Xiao Dongyu Zhang Arjun Hari Rijal Charles E. Lyons Steven R. Grossman David P. Turner Raghavendra Pillappa K. N. Bhanu Prakash Gaurav Gupta Gary L. W. G. Robinson Jennifer E. Koblinski Hongjun Wang Gita Singh Sujay Singh Sagar Rayamajhi Manny D. Bacolod Hope Richard Sadia Sayeed Katherine P. Klein David Chelmow Ronit Satchi‐Fainaro Karuppaiyah Selvendiran Denise C. Connolly Frits Thorsen Rolf Bjerkvig Kenneth P. Nephew Michael O. Idowu Mark Kühnel Christopher A. Moskaluk Seungpyo Hong William L. Redmond Göran Landberg Antonio López-Beltrán Andrew Poklepovic Arun J. Sanyal Paul B. Fisher George M. Church Usha Menon Ronny Drapkin Andrew K. Godwin Yonglun Luo Maximilian Ackermann Alexandar Tzankov

10.1038/s41587-024-02453-3 article EN Nature Biotechnology 2024-12-09

CYP2E1 plays a crucial role in the bio-activation of toxic substances leading to liver damage. In this context, converts paracetamol (PCM) N-acetyl-p-benzoquinone imine (NAPQI), which is prone cause hepatotoxicity. Hence, we aimed explore protective effect glabridin on widely used PCM-induced injury model present study and, after that, correlated with toward its efficacy. Glabridin was isolated from Glycyrrhiza glabra and characterized before investigation an in-vivo mice injury. oral...

10.1080/01480545.2021.1945004 article EN Drug and Chemical Toxicology 2021-07-07

Bone metastasis is a frequent and incurable consequence of advanced prostate cancer (PC). An interplay between disseminated tumor cells heterogeneous bone resident in the metastatic niche initiates this process. Melanoma differentiation associated gene-9 ( mda-9/Syntenin/syndecan binding protein ) prometastatic gene expressed multiple organs, including marrow–derived mesenchymal stromal (BM-MSCs), under both physiological pathological conditions. We demonstrate that PDGF-AA secreted by...

10.1073/pnas.2307094120 article EN cc-by-nc-nd Proceedings of the National Academy of Sciences 2023-11-03

The Kaposi's sarcoma-associated herpesvirus infects the human population and maintains latency stage of viral life cycle in a variety cell types including cells epithelial, mesenchymal endothelial origin. establishment latent infection by KSHV requires expression an unique repertoire genes among which associated nuclear antigen (LANA) plays critical role replication genome. LANA regulates transcription number cellular essential for survival virus host cell. present study demonstrates...

10.1371/journal.pone.0100228 article EN cc-by PLoS ONE 2014-06-27
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