Jinmyung Choi

ORCID: 0000-0003-4212-8531
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About
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Research Areas
  • Single-cell and spatial transcriptomics
  • Conducting polymers and applications
  • Perovskite Materials and Applications
  • Epigenetics and DNA Methylation
  • RNA Research and Splicing
  • Random Matrices and Applications
  • Genetic Associations and Epidemiology
  • RNA modifications and cancer
  • Gene Regulatory Network Analysis
  • Nonlinear Dynamics and Pattern Formation
  • Advanced Memory and Neural Computing
  • Semiconductor materials and devices
  • Stochastic processes and statistical mechanics
  • Aluminum Alloys Composites Properties
  • Genomics and Chromatin Dynamics
  • Ferroelectric and Negative Capacitance Devices
  • Organic Electronics and Photovoltaics
  • Aluminum Alloy Microstructure Properties
  • Advanced Algebra and Geometry
  • Mathematical Dynamics and Fractals
  • RNA and protein synthesis mechanisms
  • Psychosocial Factors Impacting Youth
  • Education and Learning Interventions
  • Quantum Dots Synthesis And Properties
  • Genomics and Rare Diseases

Samsung (South Korea)
2023-2024

Sungkyunkwan University
2022-2024

Icahn School of Medicine at Mount Sinai
2023

The University of Tokyo
2022

Yale University
2015-2021

Pusan National University
2009-2021

Kavli Institute for Theoretical Sciences
2019

University of Florida
2009-2010

Mingfeng Li Gabriel Santpere Yuka Imamura Kawasawa Oleg V. Evgrafov Forrest O. Gulden and 95 more Sirisha Pochareddy Susan M. Sunkin Zhen Li Yurae Shin Ying Zhu André M. M. Sousa Donna M. Werling Robert R. Kitchen Hyo Jung Kang Mihovil Pletikos Jinmyung Choi Sydney Muchnik Xuming Xu Daifeng Wang Belén Lorente-Galdós Shuang Liu Paola Giusti‐Rodríguez Hyejung Won Christiaan de Leeuw Antonio F. Pardiñas Ming Hu Fulai Jin Yun Li Michael J. Owen Michael O’Donovan James Walters Daniëlle Posthuma Mark A. Reimers Pat Levitt Daniel R. Weinberger Thomas M. Hyde Joel E. Kleinman Daniel H. Geschwind Michael Hawrylycz Matthew W. State Stephan Sanders Patrick F. Sullivan Mark Gerstein Ed S. Lein James A. Knowles Nenad Šestan A. Jeremy Willsey Aaron Oldre Aaron Szafer Adrian Camarena Adriana Cherskov Alexander W. Charney Alexej Abyzov Alexey Kozlenkov Alexias Safi Allan R. Jones Allison E. Ashley‐Koch Amanda Ebbert Amanda J. Price Amanda Sekijima Amira Kefi Amy Bernard Anahita Amiri Andrea Sboner Andrew E. Clark Andrew E. Jaffe Andrew T.N. Tebbenkamp Andy J. Sodt Angie Guillozet‐Bongaarts Angus C. Nairn Anita Carey Anita Hüttner Ann Chervenak Anna Szekely Annie W. Shieh Arif Harmanci Barbara K. Lipska Becky C. Carlyle Ben W. Gregor Bibi Kassim Brooke Sheppard Candace Bichsel Chang-Gyu Hahn Chang-Kyu Lee Chao Chen Chihchau L. Kuan Chinh Dang Chris Lau Christine Cuhaciyan Christoper Armoskus Christopher E. Mason Chunyu Liu Cliff Slaughterbeck Crissa Bennet Dalila Pinto Damon Polioudakis Daniel Franjic Daniel J. Miller Darren Bertagnolli David A. Lewis

INTRODUCTION The brain is responsible for cognition, behavior, and much of what makes us uniquely human. development the a highly complex process, this process reliant on precise regulation molecular cellular events grounded in spatiotemporal transcriptome. Disruption can lead to neuropsychiatric disorders. RATIONALE regulatory, epigenomic, transcriptomic features human have not been comprehensively compiled across time, regions, or cell types. Understanding etiology disorders requires...

10.1126/science.aat7615 article EN Science 2018-12-14
Anahita Amiri Gianfilippo Coppola Soraya Scuderi Feinan Wu Tanmoy Roychowdhury and 95 more Fuchen Liu Sirisha Pochareddy Yurae Shin Alexias Safi Lingyun Song Ying Zhu André M. M. Sousa Mark Gerstein Gregory E. Crawford Nenad Šestan Alexej Abyzov Flora M. Vaccarino Schahram Akbarian Joon‐Yong An Christoper Armoskus Allison E. Ashley‐Koch Thomas G. Beach Judson Belmont Jaroslav Bendl Tyler Borrman Leanne Brown Miguel Brown Mimi Brown Tonya M. Brunetti Julien Bryois Emily E. Burke Adrian Camarena Becky C. Carlyle Yooree Chae Alexander W. Charney Chao Chen Lijun Cheng Adriana Cherskov Jinmyung Choi Declan Clarke Leonardo Collado‐Torres Rujia Dai Luis de la Torre-Ubieta Diane M. Del Valle Olivia Devillers Stella Dracheva Prashant S. Emani Oleg V. Evgrafov Peggy Farnham Dominic Fitzgerald Elie Flatow Nancy Francoeur John F. Fullard Michael J. Gandal Tianliuyun Gao Melanie E. Garrett Daniel H. Geschwind Gina Giase Kiran Girdhar Paola Giusti‐Rodríguez Fernando S. Goes Thomas Goodman Kay Grennan Mengting Gu Gamze Gürsoy Evi Hadjimichael Chang-Gyu Hahn Vahram Haroutunian Mads E. Hauberg Gabriel E. Hoffman Jack Huey Thomas M. Hyde Nikolay A. Ivanov Rivka Jacobov Andrew E. Jaffe Yan Jiang Yi Jiang Graham D. Johnson Bibi Kassim Amira Kefi Yunjung Kim Robert R. Kitchen Joel E. Kleiman James A. Knowles Alexey Kozlenkov Mingfeng Li Zhen Li Barbara K. Lipska Chunyu Liu Shuang Liu Lara M. Mangravite Jessica Mariani Eugenio Mattei Daniel J. Miller J. Russell Moore Angus C. Nairn Fábio C. P. Navarro Royce Park Mette A. Peters Dalila Pinto

Genes implicated in neuropsychiatric disorders are active human fetal brain, yet difficult to study a longitudinal fashion. We demonstrate that organoids from pluripotent cells model cerebral cortical development on the molecular level before 16 weeks postconception. A multiomics analysis revealed differentially genes and enhancers, with greatest changes occurring at transition stem progenitors. Networks of converging gene enhancer modules were assembled into six four global patterns...

10.1126/science.aat6720 article EN Science 2018-12-14

The hippocampal-entorhinal system supports cognitive functions, has lifelong neurogenic capabilities in many species, and is selectively vulnerable to Alzheimer's disease. To investigate potential cellular diversity, we profiled single-nucleus transcriptomes five subregions humans, macaques, pigs. Integrated cross-species analysis revealed robust transcriptomic histologic signatures of neurogenesis the adult mouse, pig, macaque but not humans. Doublecortin (DCX), a widely accepted marker...

10.1016/j.neuron.2021.10.036 article EN cc-by-nc-nd Neuron 2021-11-18

Gene expression levels vary across developmental stage, cell type, and region in the brain. Genomic variants also contribute to variation expression, some neuropsychiatric disorder loci may exert their effects through this mechanism. To investigate these relationships, we present BrainVar, a unique resource of paired whole-genome bulk tissue RNA sequencing from dorsolateral prefrontal cortex 176 individuals prenatal postnatal development. Here identify common that alter gene (expression...

10.1016/j.celrep.2020.03.053 article EN cc-by Cell Reports 2020-04-01

Abstract Mechanically resilient optoelectronic devices are relevant for a wide range of applications, including portable and wearable devices. Perovskite thin film‐based suitable choice designing such systems as it demonstrates high performance while preserving moderate mechanical compliance. Yet its property can be improved further by integrating the energy dissipation system self‐healing ability into film. Copolymers containing Lewis‐base functional groups, elastomer chains, cyclic...

10.1002/adfm.202207142 article EN Advanced Functional Materials 2022-08-04

Abstract Dithiocarbonate‐based non‐hygroscopic polymers with a glass transition temperature ( T g ) and polydispersity index (PDI) of ≈4 °C 1, respectively, are synthesized through living cationic ring‐opening polymerization. These liquid‐state characterized by monodispersity based on the low PDI, rendering remarkable miscibility perovskite precursors without aggregation. Accordingly, these added to solar cells (PSCs) enhance their power conversion efficiency (PCE). The PCE reference PSCs...

10.1002/aenm.202203742 article EN Advanced Energy Materials 2023-02-17

Abstract This review addresses the self‐healing effects in perovskite solar cells (PSCs), emphasizing significance of chemical and physical bonding as core mechanisms. Polymeric additives play a vital role inducing phenomena along with intrinsic properties materials, both which are discussed herein. As relatively underexplored area, effect induced by polymeric PSCs is reviewed from perspective. The bonds involved include isocyanate, disulfide, carboxylic acid groups. related to primarily...

10.1002/aenm.202304062 article EN Advanced Energy Materials 2024-01-26

Abstract Nanocarbon materials, such as graphene and carbon nanotubes (CNTs), have attracted considerable attention the main or supplementary components in various optoelectronics boosting device performance improving process conditions. Specifically, their application to perovskite solar cells, which are among most promising photovoltaic devices acknowledged for eco‐friendly energy generation, has significantly impacted current standing of metal halide perovskite‐based devices. The...

10.1002/adfm.202204594 article EN Advanced Functional Materials 2022-08-23

The mechanisms whereby immune therapies affect progression of type 1 diabetes (T1D) are not well understood. Teplizumab, an FcR nonbinding anti‐CD3 mAb, has shown efficacy in multiple randomized clinical trials. We previously reported increase the frequency circulating CD8 + central memory (CD8CM) T cells responders, but generalizability this finding and molecular effects teplizumab on these have been evaluated. analyzed data from two studies patients with new‐ recent‐onset T1D. At...

10.1002/eji.201545708 article EN European Journal of Immunology 2015-10-31

Abstract Twenty-five participants listened to 8 radio messages—half of which were greater in auditory structural complexity. Physiological measures taken during message presentation, and self-report after each. Results show that increased complexity led higher self-reported physiological arousal, better attitudes toward the messages overall their nonclaim components. There no differences claims made at each level Structurally complex also freely recalled more often than simple messages. The...

10.1207/s1532785xmep0804_4 article EN Media Psychology 2006-11-01

This study pioneers a chemical sensor based on surfactant-free aerosol-synthesized single-walled carbon nanotube (SWCNT) films for detecting nitrogen dioxide (NO

10.1002/adma.202313830 article EN Advanced Materials 2024-04-08

SUMMARY The hippocampal-entorhinal system is comprised of functionally distinct subregions collectively critical for cognition, and selectively vulnerable to aging pathological processes. To gain insights into neuronal non-neuronal populations within this system, we performed single-nucleus transcriptional profiling from five human subregions. We found that transcriptomic diversity excitatory neurons across these reflected the molecular transition three-layered archicortex six-layered...

10.1101/2019.12.31.889139 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2020-01-02

Using robust, integrated analysis of multiple genomic datasets, we show that genes depleted for non-synonymous de novo mutations form a subnetwork 72 members under strong selective constraint. We further this is preferentially expressed in the early development human hippocampus and enriched mutated neurological Mendelian disorders. thus conclude carefully orchestrated developmental processes are constraint brain development, perturbations caused by mutation have adverse outcomes subject to...

10.1371/journal.pgen.1006121 article EN cc-by PLoS Genetics 2016-06-15

10.1109/vlsitechnologyandcir46783.2024.10631342 article EN 2022 IEEE Symposium on VLSI Technology and Circuits (VLSI Technology and Circuits) 2024-06-16

Perovskite solar cells (PSCs) are regarded as the next-generation thin-film energy harvester, owing to their high performance. However, there is a lack of studies on encapsulation technology, which critical for resolving shortcomings, such degradation by oxygen and moisture. It determined that moisture intrusion heat trapped within encapsulating cover glass PSCs influenced operating stability devices. Therefore, we improved barrier ability releasing capability in passivation adding...

10.3390/molecules26165060 article EN cc-by Molecules 2021-08-20

Passivation films, commonly referred to as solid–electrolyte interphase and cathode–electrolyte (CEI), are essential for the operation of rechargeable batteries due their positive impact on electrochemical performances. This paper reports a bifunctional Al2O3 artificial layer LiNiO2 (LNO) cathode high-energy-density aqueous Li-ion (ALIBs). As determined by first-principles density functional theory calculations, has relatively high adsorption energy with H2O molecules at surface, which is...

10.1021/acs.chemmater.3c02430 article EN Chemistry of Materials 2023-12-21

We introduce a family of rotationally invariant random matrix ensembles characterized by parameter λ. While λ = 1 corresponds to well-known critical ensembles, we show that ≠ describes 'Lévy-like' power-law eigenvalue densities. For > the density is bounded, as in Gaussian but < densities with long tails. In particular, model allows us evaluate, terms novel orthogonal polynomials, correlations for Lévy-like ensembles. These differ qualitatively from those either or

10.1088/1751-8113/42/15/152001 article EN Journal of Physics A Mathematical and Theoretical 2009-03-20

Recently we introduced a family of $U(N)$ invariant Random Matrix Ensembles which is characterized by parameter $\lambda$ describing logarithmic soft-confinement potentials $V(H) \sim [\ln H]^{(1+\lambda)} \:(\lambda>0$). We showed that can study eigenvalue correlations these "$\lambda$-ensembles" based on the numerical construction corresponding orthogonal polynomials with respect to weight function $\exp[- (\ln x)^{1+\lambda}]$. In this work, expand our previous work and show that: i)...

10.1103/physrevb.82.104202 article EN Physical Review B 2010-09-08

Summary Variation in gene expression underlies neurotypical development, while genomic variants contribute to neuropsychiatric disorders. BrainVar is a unique resource of paired whole-genome sequencing and bulk-tissue RNA-sequencing from the human dorsolateral prefrontal cortex 176 individuals across prenatal postnatal providing opportunity assay transcriptomic variation tandem. Leveraging this resource, we identified rare premature stop codons with commensurate reduced allele-specific...

10.1101/585430 preprint EN cc-by-nc bioRxiv (Cold Spring Harbor Laboratory) 2019-03-22

Abstract Single-walled carbon nanotubes (SWCNTs) are representative one-dimensional materials that show exceptional optical and electronic properties with various tuneable bandgaps. SWCNTs can be integrated into a variety of photovoltaics particularly, perovskite solar cells (PSCs) based on high level functionality purity. In this topical review, we discuss the fundamentals applied to PSCs as an electron-transporting layer, hole-transporting photoactive interfacial from literature. Firstly,...

10.1088/2515-7655/ac91f7 article EN cc-by Journal of Physics Energy 2022-09-14

Abstract This study presents an acetylene gas sensor capable of in situ monitoring transformer oils. utilizes carbon nanotubes (CNTs) embedded polyimide (PI) synthesized by floating catalyst chemical vapor deposition. Unlike conventional sensors that target hydrocarbon gases dissolved oil and measure the extracted from oil, proposed CNT‐PI detects within real time. The PI embedding technique effectively anchors shields CNT network against fluidic damage, ensuring stable sensing performance...

10.1002/adma.202410179 article EN Advanced Materials 2024-11-28

Abstract Spatially resolved transcriptomics (SRT) have enabled profiling spatial organization of cells and their transcriptome in situ. Various analytical methods been developed to uncover cell-cell interaction processes using SRT data. To improve upon existing efforts, we a novel statistical framework called QuadST for the robust powerful identification interaction-changed genes (ICGs) cell-type-pair specific interactions on single-cell dataset. is motivated by idea that presence...

10.1101/2023.12.04.570019 preprint EN cc-by-nd bioRxiv (Cold Spring Harbor Laboratory) 2023-12-07
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