Sergey Vasilyev

ORCID: 0000-0003-0128-6568
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Research Areas
  • Forensic Anthropology and Bioarchaeology Studies
  • Archaeology and ancient environmental studies
  • Forensic and Genetic Research
  • Pleistocene-Era Hominins and Archaeology
  • Paleopathology and ancient diseases
  • Ancient and Medieval Archaeology Studies
  • Indigenous Studies and Ecology
  • Marine and environmental studies
  • Yersinia bacterium, plague, ectoparasites research
  • Genetic diversity and population structure
  • Dental Radiography and Imaging
  • Ancient Egypt and Archaeology
  • Soil and Environmental Studies
  • Material Properties and Failure Mechanisms
  • dental development and anomalies
  • Image Processing and 3D Reconstruction
  • Pacific and Southeast Asian Studies
  • Ancient Near East History
  • Historical, Religious, and Philosophical Studies
  • Arctic and Russian Policy Studies
  • Linguistics and Cultural Studies
  • Radiomics and Machine Learning in Medical Imaging
  • Industrial Engineering and Technologies
  • Morphological variations and asymmetry
  • Archaeology and Historical Studies

Institute of Anthropology and Ethnography
2017-2025

Russian Academy of Sciences
2017-2025

Institute of Ethnology
2017-2024

Institute of Ethnology and Anthropology
2019-2024

First Pavlov State Medical University of St. Petersburg
2015-2022

Russian State University for the Humanities
2022

Institute of Archaeology and Ethnography
2022

Moscow State University of Medicine and Dentistry
2021

Universidade de São Paulo
2020

Institute of Physics and Technology
2017-2019

Iain Mathieson Songül Alpaslan-Roodenberg Cosimo Posth Anna Szécsényi‐Nagy Nadin Rohland and 95 more Swapan Mallick Ïñigo Olalde Nasreen Broomandkhoshbacht Francesca Candilio Olivia Cheronet Daniel Fernandes Matthew Ferry Beatriz Gamarra Gloria G. Fortes Wolfgang Haak Éadaoin Harney Eppie R. Jones Denise Keating Ben Krause‐Kyora İşil Küçükkalıpçı Megan Michel Alissa Mittnik Kathrin Nägele Mario Novak Jonas Oppenheimer Nick Patterson Saskia Pfrengle Kendra Sirak Kristin Stewardson Stefania Vai Stefan Alexandrov Kurt W. Alt Radian Andreescu Dragana Antonović Abigail Ash Nadezhda Atanassova Krum Bacvarov Mende Balázs Gusztáv Hervé Bocherens Michael Bolus Adina Boroneanț Yavor Boyadzhiev Alicja Budnik Josip Burmaz Stefan Chohadzhiev Nicholas J. Conard Richard Cottiaux Maja Čuka Christophe Cupillard Dorothée G. Drucker Nedko Elenski Michael Francken Borislava Galabova Georgi Ganetsovski Bernard Gély Tamás Hajdu Veneta Handzhyiska Katerina Harvati Thomas Higham Stanislav Iliev Ivor Janković Ivor Karavanić Douglas J. Kennett Darko Komšo Олександра Козак Damian Labuda Martina Lari Cǎtǎlin Lazăr Maleen Leppek Krassimir Leshtakov Domenico Lo Vetro Dženi Los Ivaylo Lozanov Maria Malina Fabio Martini Kath McSweeney Harald Meller Marko Menđušić Pavel Mirea Vyacheslav Moiseyev Vanya Petrova T. Douglas Price Angela Simalcsik Luca Sìneo Mario Šlaus Vladimir Slavchev Petar Stanev Andrej Starović Tamás Szeniczey Sahra Talamo Maria Teschler‐Nicola Corinne Thévenet Ivan Valchev Frédérique Valentin Sergey Vasilyev Fanica Veljanovska Svetlana Venelinova Elizaveta Veselovskaya Bence Viola Cristian Virag

10.1038/nature25778 article EN Nature 2018-02-21

Present-day hunter-gatherers (HGs) live in multilevel social groups essential to sustain a population structure characterized by limited levels of within-band relatedness and inbreeding. When these wider networks evolved among HGs is unknown. To investigate whether the contemporary HG strategy was already present Upper Paleolithic, we used complete genome sequences from Sunghir, site dated ~34,000 years before present, containing multiple anatomically modern human individuals. We show that...

10.1126/science.aao1807 article EN Science 2017-10-06
Iosif Lazaridis Nick Patterson David W. Anthony Leonid Vyazov Romain Fournier and 89 more Harald Ringbauer Ïñigo Olalde Aleksandr Khokhlov Еgor Kitov Natalia Shishlina Sorin Ailincăi Danila S. Agapov Sergey A. Agapov Elena Batieva Baitanayev Bauyrzhan Zsolt Bereczki Alexandra Buzhilova Piya Changmai Andrey A. Chizhevsky Ion Ciobanu Mihai Constantinescu Marietta Csányi János Dani Петр Константинович Дашковский Sándor Évinger Anatoly Faifert Pavel Flegontov Alin Frînculeasa Mădălina N. Frînculeasa Tamás Hajdu Thomas Higham Paweł Jarosz Pavol Jelínek Valeri Khartanovich Eduard N. Kirginekov Viktória Kiss Alexandera Kitova Alexeiy V. Kiyashko Jovan Koledin Arkady Ivanovich Korolev П. А. Косинцев Gabriella Kulcsár Pavel Kuznetsov R. A. Magomedov Aslan M. Mamedov Eszter Melis Vyacheslav Moiseyev Erika Molnár Janet Monge Octav Negrea Н. А. Николаева Mario Novak Maria A. Ochir-Goryaeva György Pálfi Sergiu Popovici Marina P. Rykun Tatyana M. Savenkova Vladimir P. Semibratov N. Seregin Alena Šefčáková Raikhan S. Mussayeva Irina Shingiray Vladimir N. Shirokov Angela Simalcsik Kendra Sirak K.N. Solodovnikov Judit Tárnoki А. Tishkin Viktor Trifonov Sergey Vasilyev Ali Akbari Esther S. Brielle Kimberly Callan Francesca Candilio Olivia Cheronet Elizabeth Curtis Olga Flegontova Lora Iliev Aisling Kearns Denise Keating Ann Marie Lawson Matthew Mah Adam Micco Megan Michel Jonas Oppenheimer Lijun Qiu J. Noah Workman Fatma Zalzala Anna Szécsényi‐Nagy Pier Francesco Palamara Swapan Mallick Nadin Rohland Ron Pinhasi David Reich

10.1038/s41586-024-08531-5 article EN Nature 2025-02-05

Significance The bacterium Yersinia pestis has caused numerous historically documented outbreaks of plague and research using ancient DNA could demonstrate that it already affected human populations during the Neolithic. However, pathogen’s genetic diversity, geographic spread, transmission dynamics this early period Y. evolution are largely unexplored. Here, we describe a set genomes up to 5,000 y old from across Eurasia. Our data two genetically distinct forms evolved in parallel were both...

10.1073/pnas.2116722119 article EN cc-by Proceedings of the National Academy of Sciences 2022-04-12

Aim . Current clinical recommendations accentuate current methods for the diagnosis and treatment of irritable bowel syndrome (IBS). Key points. IBS is a functional disorder manifested with recurrent, at least weekly, abdominal pain following attributes (any two leastwise): link to defecation, its frequency or stool shape. The symptoms are expected persist minimum three months in total six-month follow-up. Similar other gastrointestinal (GI) disorders, can be diagnosed basing on patient...

10.22416/1382-4376-2021-31-5-74-95 article EN cc-by-nc-nd Russian Journal of Gastroenterology Hepatology Coloproctology 2022-01-02
Vagheesh M. Narasimhan Nick Patterson Priya Moorjani Iosif Lazaridis Mark Lipson and 87 more Swapan Mallick Nadin Rohland Rebecca Bernardos Alexander M. Kim Nathan Nakatsuka Ïñigo Olalde Alfredo Coppa J. P. Mallory Vyacheslav Moiseyev Janet Monge Luca M. Olivieri Nicole Adamski Nasreen Broomandkhoshbacht Francesca Candilio Olivia Cheronet Brendan J. Culleton Matthew Ferry Daniel Fernandes Beatriz Gamarra Daniel Gaudio Mateja Hajdinjak Éadaoin Harney Thomas K. Harper Denise Keating Ann Marie Lawson Megan Michel Mario Novak Jonas Oppenheimer Niraj Rai Kendra Sirak Viviane Slon Kristin Stewardson Zhao Zhang Gaziz Akhatov A.N. Bagashev Bauryzhan Baitanayev Gian Luca Bonora Т. А. Чикишева А. П. Деревянко Enshin Dmitry Katerina Douka Надежда Дубова Andrey Epimakhov Suzanne Freilich Dorian Q. Fuller Alexander Goryachev Andrey Gromov Bryan Hanks Margaret A. Judd Erlan Kazizov Aleksandr Khokhlov Еgor Kitov Elena Kupriyanova Pavel Kuznetsov Donata Luiselli Farhod Maksudov Christopher Meiklejohn Deborah C. Merrett Roberto Micheli Oleg Dmitrievich Mochalov Zahir Muhammed Samariddin Mustafokulov Ayushi Nayak Rykun M. Petrovna Davide Pettener Richard Potts Dmitry Razhev Stefania Sarno Kulyan Sikhymbaeva Sergey Slepchenko N. F. Stepanova Svetlana V Svyatko Sergey Vasilyev Massimo Vidale Dmitriy Voyakin Antonina Yermolayeva А. В. Зубова Vasant Shinde Carles Lalueza‐Fox Matthias Meyer David W. Anthony Nicole Boivin Kumarasamy Thangaraj Douglas J. Kennett Michael D. Frachetti Ron Pinhasi David Reich

Abstract The genetic formation of Central and South Asian populations has been unclear because an absence ancient DNA. To address this gap, we generated genome-wide data from 362 individuals, including the first eastern Iran, Turan (Uzbekistan, Turkmenistan, Tajikistan), Bronze Age Kazakhstan, Asia. Our reveal a complex set sources that ultimately combined to form ancestry Asians today. We document southward spread Eurasian Steppe, correlating with archaeologically known expansion...

10.1101/292581 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2018-03-31

The transition from Stone to Bronze Age in Central and Western Europe was a period of major population movements originating the Ponto-Caspian Steppe. Here, we report new genome-wide sequence data 30 individuals north this area, understudied western part present-day Russia, including 3 hunter-gatherers (10,800 4250 cal BCE) 26 farmers Corded Ware complex Fatyanovo Culture (2900 2050 BCE). We show that Eastern hunter-gatherer ancestry present northwestern Russia already around 10,000 BCE....

10.1126/sciadv.abd6535 article EN cc-by-nc Science Advances 2021-01-20

Ancient DNA sampling methods—although optimized for efficient extraction—are destructive, relying on drilling or cutting and powdering (parts of) bones teeth. As the field of ancient has grown, so have concerns about impact destructive skeletal remains from which is obtained. Due to a particularly high concentration endogenous DNA, cementum tooth roots often targeted sampling, but methods result in loss at least one entire root. Here, we present minimally method extracting dental surface...

10.1101/gr.267534.120 article EN cc-by-nc Genome Research 2021-02-12

DNA recovery from ancient human remains has revolutionized our ability to reconstruct the genetic landscape of past. Ancient research benefited identification skeletal elements, such as cochlear part osseous inner ear, that provides optimal contexts for preservation; however, rich information obtained cochlea must be counterbalanced against loss morphological caused by its sampling. Motivated similarities in developmental processes and histological properties between auditory ossicles, we...

10.1101/gr.260141.119 article EN cc-by-nc Genome Research 2020-02-25
Iosif Lazaridis Nick Patterson David W. Anthony Leonid Vyazov Romain Fournier and 89 more Harald Ringbauer Ïñigo Olalde Aleksandr Khokhlov Еgor Kitov Natalia Shishlina Sorin Ailincăi Danila S. Agapov Sergey A. Agapov Elena Batieva Baitanayev Bauyrzhan Zsolt Bereczki Alexandra Buzhilova Piya Changmai Andrey A. Chizhevsky Ion Ciobanu Mihai Constantinescu Marietta Csányi János Dani Peter K. Dashkovskiy Sándor Évinger Anatoly Faifert Pavel Flegontov Alin Frînculeasa Mădălina N. Frînculeasa Tamás Hajdu Thomas Higham Paweł Jarosz Pavol Jelínek Valeri Khartanovich Eduard N. Kirginekov Viktória Kiss Alexandera Kitova Alexeiy V. Kiyashko Jovan Koledin Arkady Ivanovich Korolev П. А. Косинцев Gabriella Kulcsár Pavel Kuznetsov R. A. Magomedov Mamedov Aslan Malikovich Eszter Melis Vyacheslav Moiseyev Erika Molnár Janet Monge Octav Negrea Н. А. Николаева Mario Novak Maria A. Ochir-Goryaeva György Pálfi Sergiu Popovici Marina P. Rykun Tatyana M. Savenkova Vladimir P. Semibratov N. Seregin Alena Šefčáková Mussayeva Raikhan Serikovna Irina Shingiray Vladimir N. Shirokov Angela Simalcsik Kendra Sirak K.N. Solodovnikov Judit Tárnoki Alexey A. Tishkin Viktov Trifonov Sergey Vasilyev Ali Akbari Esther S. Brielle Kimberly Callan Francesca Candilio Olivia Cheronet Elizabeth Curtis Olga Flegontova Lora Iliev Aisling Kearns Denise Keating Ann Marie Lawson Matthew Mah Adam Micco Megan Michel Jonas Oppenheimer Lijun Qiu J. Noah Workman Fatma Zalzala Anna Szécsényi‐Nagy Pier Francesco Palamara Swapan Mallick Nadin Rohland Ron Pinhasi David Reich

The Yamnaya archaeological complex appeared around 3300BCE across the steppes north of Black and Caspian Seas, by 3000BCE reached its maximal extent from Hungary in west to Kazakhstan east. To localize ancestral geographical origins among diverse Eneolithic people that preceded them, we studied ancient DNA data 428 individuals which 299 are reported for first time, demonstrating three previously unknown genetic clines. First, a “Caucasus-Lower Volga” (CLV) Cline suffused with Caucasus...

10.1101/2024.04.17.589597 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2024-04-18
Iain Mathieson Songül Alpaslan Roodenberg Cosimo Posth Anna Szécsényi‐Nagy Nadin Rohland and 95 more Swapan Mallick Ïñigo Olalde Nasreen Broomandkhoshbacht Francesca Candilio Olivia Cheronet Daniel Fernandes Matthew Ferry Beatriz Gamarra Gloria G. Fortes Wolfgang Haak Éadaoin Harney Eppie R. Jones Denise Keating Ben Krause‐Kyora İşil Küçükkalıpçı Megan Michel Alissa Mittnik Kathrin Nägele Mario Novak Jonas Oppenheimer Nick Patterson Saskia Pfrengle Kendra Sirak Kristin Stewardson Stefania Vai Stefan Alexandrov Kurt W. Alt Radian Andreescu Dragana Antonović Abigail Ash Nadezhda Atanassova Krum Bacvarov Mende Balázs Gusztáv Hervé Bocherens Michael Bolus Adina Boroneanț Yavor Boyadzhiev Alicja Budnik Josip Burmaz Stefan Chohadzhiev Nicholas J. Conard Richard Cottiaux Maja Čuka Christophe Cupillard Dorothée G. Drucker Nedko Elenski Michael Francken Borislava Galabova Georgi Ganetovski Bernard Gély Tamás Hajdu Veneta Handzhyiska Katerina Harvati Thomas Higham Stanislav Iliev Ivor Janković Ivor Karavanić Douglas J. Kennett Darko Komšo Alexandra Kozak Damian Labuda Martina Lari Cǎtǎlin Lazăr Maleen Leppek Krassimir Leshtakov Domenico Lo Vetro Dženi Los Ivaylo Lozanov Maria Malina Fabio Martini Kath McSweeney Harald Meller Marko Menđušić Pavel Mirea Vyacheslav Moiseyev Vanya Petrova T. Douglas Price Angela Simalcsik Luca Sìneo Mario Šlaus Vladimir Slavchev Petar Stanev Andrej Starović Tamás Szeniczey Sahra Talamo Maria Teschler‐Nicola Corinne Thévenet Ivan Valchev Frédérique Valentin Sergey Vasilyev Fanica Veljanovska Svetlana Venelinova Elizaveta Veselovskaya Bence Viola Cristian Virag

Abstract Farming was first introduced to southeastern Europe in the mid-7 th millennium BCE – brought by migrants from Anatolia who settled region before spreading throughout Europe. To clarify dynamics of interaction between farmers and indigenous hunter-gatherers where they met, we analyze genome-wide ancient DNA data 223 individuals lived surrounding regions 12,000 500 BCE. We document previously uncharacterized genetic structure, showing a West-East cline ancestry hunter-gatherers, show...

10.1101/135616 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2017-05-09

Three isolated human deciduous teeth have been discovered in the course of working with collection from 2nd dwelling complex Kostenki 1(I) which is stored at IHMC RAS. No information about these has published until now. The come southern part complex; they were found not far hearth line. context their discovery testifies that neither structure nor filling this excavation radically differed those other studied areas complex, suggests occurrence cultural layer had a random character....

10.55086/sp251369387 article EN Stratum plus Archaeology and Cultural Anthropology 2025-02-27

Abstract As our human ancestors migrated into Eurasia, they faced a considerably harsher climate, but the extent to which cranial morphology has adapted this climate is still debated. In particular, it remains unclear when such facial adaptations arose in populations. Here, we explore climate-associated features of face shape worldwide modern sample using 3D geometric morphometrics and novel application reduced rank regression. Based on these data, assess two crucial Upper Palaeolithic...

10.1038/s41598-021-86830-x article EN cc-by Scientific Reports 2021-04-12

Abstract Paleo-Eskimos were the first people to settle vast regions of American Arctic around 5,000 years ago, and subsequently joined largely displaced 1,000 ago by ancestors present-day Inuit Yupik. The genetic relationship between Native populations remains uncertain. We analyze ancient genome-wide data from Americas Siberia, including new Alaskan Iñupiat West Siberian populations, DNA Aleutian Islanders, northern Athabaskans, a 4,250-year-old individual Chukotkan Ust'-Belaya culture....

10.1101/203018 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2017-10-13

10.17746/1563-0110.2024.52.3.118-126 article EN Archaeology Ethnology and Anthropology of Eurasia 2024-10-09

Abstract Transition from the Stone to Bronze Age in Central and Western Europe was a period of major population movements originating Ponto-Caspian Steppe. Here, we report new genome-wide sequence data 28 individuals territory north this source area – under-studied part present-day Russia, including hunter-gatherers (10,800–4,250 cal BC) farmers Corded Ware complex called Fatyanovo Culture (2,900–2,050 BC). We show that Eastern hunter-gatherer ancestry present Northwestern Russia already...

10.1101/2020.07.02.184507 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2020-07-03

Abstract Archaeologically defined Upper Palaeolithic (UP, 45,000–10,000 years ago) “cultures” are often used as proxies to designate fossil populations. While recent genomic studies have partly clarified the complex relationship between European UP and past population dynamics, they leave open numerous questions regarding biological characterization of these human groups, especially Mid-UP period (MUP, 33,000–24,000 ago), which encompasses a pan-European cultural mosaic (Gravettian) with...

10.1038/s41598-020-78841-x article EN cc-by Scientific Reports 2020-12-14
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