Rui Feng

ORCID: 0000-0003-4151-7228
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Systemic Lupus Erythematosus Research
  • Neonatal Respiratory Health Research
  • Respiratory Support and Mechanisms
  • Inflammatory Myopathies and Dermatomyositis
  • Sepsis Diagnosis and Treatment
  • Genetic Associations and Epidemiology
  • Transplantation: Methods and Outcomes
  • Autoimmune Bullous Skin Diseases
  • Dermatology and Skin Diseases
  • T-cell and B-cell Immunology
  • Monoclonal and Polyclonal Antibodies Research
  • Eosinophilic Disorders and Syndromes
  • Congenital Diaphragmatic Hernia Studies
  • Hip and Femur Fractures
  • Psoriasis: Treatment and Pathogenesis
  • Organ Transplantation Techniques and Outcomes
  • Chronic Obstructive Pulmonary Disease (COPD) Research
  • Genetic Mapping and Diversity in Plants and Animals
  • Cardiac, Anesthesia and Surgical Outcomes
  • Gene expression and cancer classification
  • Renal Transplantation Outcomes and Treatments
  • Systemic Sclerosis and Related Diseases
  • Cancer-related molecular mechanisms research
  • Immune Response and Inflammation
  • MicroRNA in disease regulation

University of Pennsylvania
2016-2025

University of Science and Technology Beijing
2022-2025

California University of Pennsylvania
2019-2025

Jilin University
2025

First Affiliated Hospital of Guangzhou Medical University
2025

State Key Laboratory of Respiratory Disease
2025

Guangzhou Medical University
2025

Beijing Children’s Hospital
2025

Capital Medical University
2025

Northwestern University
2025

Journal Article Variable selection in regression with compositional covariates Get access Wei Lin, Lin Department of Biostatistics and Epidemiology, Perelman School Medicine, University Pennsylvania, Philadelphia, Pennsylvania 19104, U.S.A., weilin1@mail.med.upenn.edupixushi@mail.med.upenn.eduruifeng@mail.med.upenn.eduhongzhe@upenn.edu Search for other works by this author on: Oxford Academic Google Scholar Pixu Shi, Shi Rui Feng, Feng Hongzhe Li Biometrika, Volume 101, Issue 4, December...

10.1093/biomet/asu031 article EN Biometrika 2014-08-13
Roberta L. Keller Rui Feng Sara B. DeMauro Thomas W. Ferkol William D. Hardie and 95 more Elizabeth E. Rogers Timothy P. Stevens Judith A. Voynow Scarlett L. Bellamy Pamela A. Shaw Paul E. Moore Barbara D. Alexander Claire Chougnet Tari L. Gratton James M. Greenberg Cathy Grisby Alan H. Jobe Beth Koch Karen M. McDowell Kelly Thornton Pamela Bates Claudia Cleveland Aaron Hamvas Julie Hoffmann Mark Holland James S. Kemp Philip T. Levy Laura Linneman Jayne Sicard-Su Gina Simpson Gautam K. Singh Barbara Warner Philip L. Ballard Roberta A. Ballard David J. Durand Eric C. Eichenwald Amir Khan Leslie Lusk Jeffrey D. Merrill Dennis W. Nielson Jeanette Asselin Samantha Balan Katrina Burson Cheryl Chapin Erna Josiah-Davis Carmen Garcia Hart Horneman Rick Hinojosa Christopher N. Johnson Susan Kelley Karin L. Knowles M. Layne Lillie Karen Martin Sarah K. Martin Julie Arldt-McAlister Georgia E. McDavid Lori Pacello Shawna Rodgers Daniel K. Sperry Judy L. Aschner Amy B. Beller Candice D. Fike Scott O. Guthrie Tina V. Hartert Nathalie L. Maitre Mark O'Hunt Theresa J. Rogers Odessa L. Settles Steven Steele Marshall Summar Sharon Wadley Carl T. D’Angio Vasanth Kumar T.J. Mariani Gloria Pryhuber Clement L. Ren Anne Marie Reynolds Rita M. Ryan Kristin Scheible Heidie Huyck Valerie Lunger Shannon Castiglione Aimee Horan Deanna Maffet Jane O’Donnell Michael Sacilowski Tanya Scalise Elizabeth Werner Jason Zayac Kim Bordeaux Pam Brown Julia Epping Lisa Flattery-Walsh Donna Germuga Nancy Piper Jenks Mary Jane Platt Eileen Popplewell Sandra Prentice Kim Ciccio C. Michael Cotten

10.1016/j.jpeds.2017.04.026 article EN The Journal of Pediatrics 2017-05-17

Context: The mechanisms by which testosterone increases hemoglobin and hematocrit are unknown. Objective: aim was to test the hypothesis that testosterone-induced increase in is associated with suppression of iron regulatory peptide hepcidin. Participants: Healthy younger men (ages 19–35 yr; n = 53) older 59–75 56) were studied. Methods: Weekly doses enanthate (25, 50, 125, 300, 600 mg) administered over 20 wk, whereas endogenous suppressed monthly GnRH agonist administration. Blood serum...

10.1210/jc.2010-0864 article EN The Journal of Clinical Endocrinology & Metabolism 2010-07-22

<h3>Objective</h3> <i>Helicobacter pylori</i> strains that express the oncoprotein CagA augment risk for gastric cancer. However, precise mechanisms through which <i>cag</i><sup>+</sup> heighten cancer have not been fully delineated and model systems recapitulate niche are critical understanding pathogenesis. Gastroids three-dimensional organ-like structures provide unique opportunities to study host-<i>H. interactions in a preclinical model. We used gastroids inform direct vitro studies...

10.1136/gutjnl-2014-307650 article EN Gut 2014-08-14

The incidence of pediatric hospitalizations for community-acquired pneumonia (CAP) has declined after the widespread use heptavalent pneumococcal conjugate vaccine. national outpatient visits CAP, however, is not well established. Although no CAP treatment guidelines are available, current data support narrow-spectrum antibiotics as first-line most patients with CAP.To estimate rates examine time trends in prescribed and determine factors associated broad-spectrum antibiotic prescribing...

10.1542/peds.2010-2008 article EN PEDIATRICS 2011-02-15

Background: Since T cell exclusion contributes to tumor immune evasion and immunotherapy resistance, how improve infiltration into solid tumors becomes an urgent challenge. Methods: We employed deep learning profile the microenvironment (TIME) in triple negative breast cancer (TNBC) samples from TCGA datasets noticed that fibroblast growth factor receptor (FGFR) signaling pathways were enriched immune-excluded phenotype of TNBC. Erdafitinib, a selective FGFR inhibitor, was then used...

10.7150/thno.68972 article EN cc-by Theranostics 2022-01-01

Background: The REGAIN (Regional versus General Anesthesia for Promoting Independence after Hip Fracture) trial found similar ambulation and survival at 60 days with spinal general anesthesia hip fracture surgery. Trial outcomes evaluating pain, prescription analgesic use, patient satisfaction have not yet been reported. Objective: To compare surgery anesthesia. Design: Preplanned secondary analysis of a pragmatic randomized trial. (ClinicalTrials.gov: NCT02507505) Setting: 46 U.S. Canadian...

10.7326/m22-0320 article EN Annals of Internal Medicine 2022-06-13

Rationale: Inhibition of aromatase with anastrozole reduces pulmonary hypertension in experimental models. Objectives: We aimed to determine whether improved the 6-minute-walk distance (6MWD) at 6 months arterial (PAH). Methods: performed a randomized, double-blind, placebo-controlled phase II clinical trial subjects PAH seven centers. Eighty-four postmenopausal women and men were randomized 1:1 ratio receive 1 mg or placebo by mouth daily, stratified sex using permuted blocks variable...

10.1164/rccm.202402-0371oc article EN American Journal of Respiratory and Critical Care Medicine 2024-05-15

OBJECTIVES. The goals were to isolate and estimate the genetic susceptibility retinopathy of prematurity. METHODS. A retrospective study (1994–2004) from 3 centers was performed with zygosity data for premature twins who born at a gestational age ≤32 weeks survived beyond postmenstrual 36 weeks. Retinopathy prematurity diagnosed staged by pediatric ophthalmologists each center. Data analyses mixed-effects logistic regression analysis latent variable probit modeling. RESULTS. total 63...

10.1542/peds.2006-1088 article EN PEDIATRICS 2006-11-01

Acute lung injury (ALI) acts as a complex genetic trait, yet its risk factors remain incompletely understood. Large-scale genotyping has not previously been reported for ALI.To identify ALI variants after major trauma using large-scale candidate gene approach.We performed two-stage association study. We derived findings in an African American cohort (n = 222) cardiopulmonary disease-centric 50K single nucleotide polymorphism (SNP) array. Genotype and haplotype distributions were compared...

10.1164/rccm.201005-0701oc article EN American Journal of Respiratory and Critical Care Medicine 2011-01-22

Abstract Introduction Aromatase inhibitor-associated arthralgia (AIAA) is a common and often debilitating symptom in breast cancer survivors. Since joint symptoms have been related to estrogen deprivation through the menopausal transition, we hypothesized that genetic polymorphisms CYP19A1 , final enzyme synthesis, may be associated with occurrence of AIAA. Methods We performed cross-sectional study postmenopausal women stage 0 III receiving adjuvant aromatase inhibitor (AI) therapy....

10.1186/bcr2813 article EN cc-by Breast Cancer Research 2011-01-20

Introduction Hip fractures occur 1.6 million times each year worldwide, with substantial associated mortality and losses of independence. At present, anaesthesia care for hip fracture surgery varies widely within between countries, general spinal representing the 2 most common approaches. Limited randomised evidence exists regarding potential short-term or long-term differences in outcomes patients receiving surgery. Methods The REGAIN trial (Regional vs General Anesthesia Promoting...

10.1136/bmjopen-2016-013473 article EN cc-by-nc BMJ Open 2016-11-01

Plasma interleukin-1 beta may influence sepsis mortality, yet recombinant human receptor antagonist did not reduce mortality in randomized trials. We tested for heterogeneity the treatment effect of by baseline plasma or concentration.Retrospective subgroup analysis controlled trial.Multicenter North American and European clinical trial.Five hundred twenty-nine subjects with hypotension hypoperfusion, representing 59% original trial population.Random assignment placebo × 72 hours.We measured...

10.1097/ccm.0000000000002749 article EN Critical Care Medicine 2017-10-07

Acute Lung Injury (ALI) is a syndrome with high associated mortality characterized by severe hypoxemia and pulmonary infiltrates in patients critical illness. We conducted the first investigation to use genome wide association (GWA) approach identify putative risk variants for ALI. Genome genotyping was performed using Illumina Human Quad 610 BeadChip. two-stage GWA study followed third stage of functional characterization. In discovery phase (Phase 1), we compared 600 European American...

10.1371/journal.pone.0028268 article EN cc-by PLoS ONE 2012-01-25

Acute respiratory distress syndrome (ARDS) behaves as a complex genetic trait, yet knowledge of susceptibility factors remains incomplete.

10.1164/rccm.201208-1501oc article EN American Journal of Respiratory and Critical Care Medicine 2013-03-01

In genetical genomics studies, it is important to jointly analyze gene expression data and genetic variants in exploring their associations with complex traits, where the dimensionality of expressions can both be much larger than sample size. Motivated by such modern applications, we consider problem variable selection estimation high-dimensional sparse instrumental variables models. To overcome difficulty high unknown optimal instruments, propose a two-stage regularization framework for...

10.1080/01621459.2014.908125 article EN Journal of the American Statistical Association 2014-04-08

Acute respiratory distress syndrome (ARDS) lacks known causal biomarkers. Plasma concentrations of sRAGE (soluble receptor for advanced glycation end products) strongly associate with ARDS risk. However, whether plasma contributes causally to remains unknown.

10.1164/rccm.201810-2033oc article EN American Journal of Respiratory and Critical Care Medicine 2019-09-05
Coming Soon ...