Rebecca C. Fitzgerald

ORCID: 0000-0002-3434-3568
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Esophageal Cancer Research and Treatment
  • Gastric Cancer Management and Outcomes
  • Helicobacter pylori-related gastroenterology studies
  • Esophageal and GI Pathology
  • Cancer Genomics and Diagnostics
  • Gastrointestinal Tumor Research and Treatment
  • Eosinophilic Esophagitis
  • Genetic factors in colorectal cancer
  • Cancer-related gene regulation
  • Gastroesophageal reflux and treatments
  • Facial Rejuvenation and Surgery Techniques
  • Lung Cancer Treatments and Mutations
  • Pancreatic and Hepatic Oncology Research
  • RNA modifications and cancer
  • Lung Cancer Diagnosis and Treatment
  • Epigenetics and DNA Methylation
  • Dermatologic Treatments and Research
  • Gastrointestinal disorders and treatments
  • Genomic variations and chromosomal abnormalities
  • Radiomics and Machine Learning in Medical Imaging
  • Cancer-related molecular mechanisms research
  • Metastasis and carcinoma case studies
  • Molecular Biology Techniques and Applications
  • Botulinum Toxin and Related Neurological Disorders
  • Cancer Immunotherapy and Biomarkers

University of Cambridge
2016-2025

Cancer Research UK Cambridge Center
2020-2025

Cancer Institute (WIA)
2023-2025

Hutchison/MRC Research Centre
2015-2024

MRC Cancer Unit
2015-2024

University of California, Los Angeles
2008-2024

Guy's Hospital
2024

Queen Mary University of London
2001-2024

Boston Children's Hospital
2024

Guy's and St Thomas' NHS Foundation Trust
2024

These guidelines provide a practical and evidence-based resource for the management of patients with Barrett9s oesophagus related early neoplasia. The Appraisal Guidelines Research Evaluation (AGREE II) instrument was followed to methodological strategy guideline development. A systematic review literature performed English language articles published up until December 2012 in order address controversial issues including definition, screening diagnosis, surveillance, pathological grading...

10.1136/gutjnl-2013-305372 article EN Gut 2013-10-28

The mutational burden of aging As people age, they accumulate somatic mutations in healthy cells. About 25% cells normal, sun-exposed skin harbor cancer driver mutations. What about tissues not exposed to powerful mutagens like ultraviolet light? Martincorena et al. performed targeted gene sequencing normal esophageal epithelium from nine human donors varying age (see the Perspective by Chanock). mutation rate was lower esophagus than skin, but there a strong positive selection clones...

10.1126/science.aau3879 article EN Science 2018-10-19

25–30% of families fulfilling the criteria for hereditary diffuse gastric cancer have germline mutations <i>CDH1</i> (E-cadherin) gene. In light new data and advancement technologies, a multidisciplinary workshop was convened to discuss genetic testing, surgery, endoscopy pathology reporting. The updated recommendations include broadening testing such that: histological confirmation is only required one family member; inclusion individuals with before age 40 years without history; diagnoses...

10.1136/jmg.2009.074237 article EN cc-by-nc Journal of Medical Genetics 2010-06-30

The Human Cell Atlas is a large international collaborative effort to map all cell types of the human body. Single-cell RNA sequencing can generate high-quality data for delivery such an atlas. However, delays between fresh sample collection and processing may lead poor difficulties in experimental design.This study assesses effect cold storage on healthy spleen, esophagus, lung from ≥ 5 donors over 72 h. We collect 240,000 single-cell transcriptomes with detailed type annotations whole...

10.1186/s13059-019-1906-x article EN cc-by Genome biology 2019-12-31
Bernardo Rodríguez–Martín Eva G. Álvarez Adrian Baez‐Ortega Jorge Zamora Fran Supek and 95 more Jonas Demeulemeester Martín Santamarina Young Seok Ju Javier Temes Daniel García‐Souto Harald Detering Yilong Li Jorge Rodríguez‐Castro Ana Dueso-Barroso Alicia L. Bruzos Stefan C. Dentro Miguel G. Blanco Gianmarco Contino Daniel Ardeljan Marta Tojo Nicola D. Roberts Sonia Zumalave Paul A. Edwards Joachim Weischenfeldt Montserrat Puiggròs Zechen Chong Ken Chen Eunjung Alice Lee Jeremiah A. Wala Keiran Raine Adam P. Butler Sebastian M. Waszak Fábio C. P. Navarro Steven E. Schumacher Jean Monlong Francesco Maura Niccolò Bolli Guillaume Bourque Mark Gerstein Peter J. Park David C. Wedge Rameen Beroukhim David Torrents Jan O. Korbel Iñigo Martincorena Rebecca C. Fitzgerald Peter Van Loo Haig H. Kazazian Kathleen H. Burns Kadir C. Akdemir Eva G. Álvarez Adrian Baez‐Ortega Rameen Beroukhim Paul C. Boutros David D.L. Bowtell Benedikt Brors Kathleen H. Burns Peter J. Campbell Kin Chan Ken Chen Isidro Cortés‐Ciriano Ana Dueso-Barroso Andrew Dunford Paul A. Edwards Xavier Estivill Dariush Etemadmoghadam Lars Feuerbach J. Lynn Fink Milana Frenkel‐Morgenstern Dale W. Garsed Mark Gerstein Dmitry A. Gordenin David Haan James E. Haber Julian M. Hess Barbara Hutter Marcin Imieliński David Jones Young Seok Ju Marat D. Kazanov Leszek J. Klimczak Youngil Koh Jan O. Korbel Kiran Kumar Eunjung Alice Lee Jake June-Koo Lee Yilong Li Andy G. Lynch Geoff Macintyre Florian Markowetz Iñigo Martincorena Alexander Martinez‐Fundichely Matthew Meyerson Satoru Miyano Hidewaki Nakagawa Fábio C. P. Navarro Stephan Ossowski Peter J. Park John V. Pearson Montserrat Puiggròs

Abstract About half of all cancers have somatic integrations retrotransposons. Here, to characterize their role in oncogenesis, we analyzed the patterns and mechanisms retrotransposition 2,954 cancer genomes from 38 histological subtypes within framework Pan-Cancer Analysis Whole Genomes (PCAWG) project. We identified 19,166 somatically acquired events, which affected 35% samples spanned a range event types. Long interspersed nuclear element (LINE-1; L1 hereafter) insertions emerged as first...

10.1038/s41588-019-0562-0 article EN cc-by Nature Genetics 2020-02-05

<b>Objectives</b> To determine the accuracy and acceptability to patients of non-endoscopic screening for Barrett’s oesophagus, using an ingestible oesophageal sampling device (Cytosponge) coupled with immunocytochemisty trefoil factor 3. <b>Design</b> Prospective cohort study. <b>Setting</b> 12 UK general practices, gastroscopies carried out in one hospital endoscopy unit. <b>Participants</b> 504 2696 eligible (18.7%) aged 50 70 years a previous prescription acid suppressant (H<sub>2</sub>...

10.1136/bmj.c4372 article EN cc-by-nc BMJ 2010-01-25

Selenium, a trace element that is fundamental to human health, incorporated into some proteins as selenocysteine (Sec), generating family of selenoproteins. Sec incorporation mediated by multiprotein complex includes insertion sequence-binding protein 2 (SECISBP2; also known SBP2). Here, we describe subjects with compound heterozygous defects in the SECISBP2 gene. These individuals have reduced synthesis most 25 selenoproteins, resulting phenotype. Azoospermia, failure latter stages...

10.1172/jci43653 article EN Journal of Clinical Investigation 2010-11-17

10.1038/ng.3357 article EN Nature Genetics 2015-07-20

Background Barrett's esophagus (BE) is a commonly undiagnosed condition that predisposes to esophageal adenocarcinoma. Routine endoscopic screening for BE not recommended because of the burden this would impose on health care system. The objective study was determine whether novel approach using minimally invasive cell sampling device, Cytosponge, coupled with immunohistochemical staining biomarker Trefoil Factor 3 (TFF3), could be used identify patients who warrant endoscopy diagnose BE....

10.1371/journal.pmed.1001780 article EN cc-by PLoS Medicine 2015-01-29

Abstract Esophageal adenocarcinoma (EAC) incidence is increasing while 5-year survival rates remain less than 15%. A lack of experimental models has hampered progress. We have generated clinically annotated EAC organoid cultures that recapitulate the morphology, genomic, and transcriptomic landscape primary tumor including point mutations, copy number alterations, mutational signatures. Karyotyping confirmed polyclonality reflecting clonal architecture tumor. Furthermore, subclones underwent...

10.1038/s41467-018-05190-9 article EN cc-by Nature Communications 2018-07-24

Oesophageal adenocarcinoma is the sixth most common cause of cancer death worldwide and Barrett's oesophagus biggest risk factor. We aimed to evaluate efficacy high-dose esomeprazole proton-pump inhibitor (PPI) aspirin for improving outcomes in patients with oesophagus.

10.1016/s0140-6736(18)31388-6 article EN cc-by The Lancet 2018-07-26

Treatment of dysplastic Barrett's oesophagus prevents progression to adenocarcinoma; however, the optimal diagnostic strategy for is unclear. The Cytosponge-trefoil factor 3 (TFF3) a non-endoscopic test oesophagus. aim this study was investigate whether offering patients on medication gastro-oesophageal reflux would increase detection compared with standard management.

10.1016/s0140-6736(20)31099-0 article EN cc-by The Lancet 2020-07-30

A major challenge in cancer treatment is predicting clinical response to anti-cancer drugs on a personalized basis. Using pharmacogenomics database of 1,001 cell lines, we trained deep neural networks for prediction drug and assessed their performance multiple cohorts. We demonstrate that outperform the current state machine learning frameworks. provide proof concept use network-based frameworks aid precision oncology strategies.

10.1016/j.celrep.2019.11.017 article EN cc-by Cell Reports 2019-12-01
Coming Soon ...