Richard J. Perrin

ORCID: 0000-0002-3443-7716
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About
Contact & Profiles
Research Areas
  • Alzheimer's disease research and treatments
  • Dementia and Cognitive Impairment Research
  • Functional Brain Connectivity Studies
  • Bioinformatics and Genomic Networks
  • Parkinson's Disease Mechanisms and Treatments
  • Neuroinflammation and Neurodegeneration Mechanisms
  • Advanced Neuroimaging Techniques and Applications
  • Health, Environment, Cognitive Aging
  • Metabolomics and Mass Spectrometry Studies
  • Genetic Associations and Epidemiology
  • Neurological Disease Mechanisms and Treatments
  • Neurological diseases and metabolism
  • Prion Diseases and Protein Misfolding
  • Tryptophan and brain disorders
  • Down syndrome and intellectual disability research
  • Frailty in Older Adults
  • Amyloidosis: Diagnosis, Treatment, Outcomes
  • Advanced Proteomics Techniques and Applications
  • Intracerebral and Subarachnoid Hemorrhage Research
  • Neurological disorders and treatments
  • S100 Proteins and Annexins
  • Single-cell and spatial transcriptomics
  • Nuclear Receptors and Signaling
  • Meningioma and schwannoma management
  • Chronic Disease Management Strategies

Washington University in St. Louis
2016-2025

Alzheimer’s Disease Neuroimaging Initiative
2022-2025

Hope Center for Neurological Disorders
2013-2024

Mallinckrodt (United States)
2007-2024

University of Ulsan
2024

Asan Medical Center
2024

Dankook University
2024

Ulsan College
2024

Hospital for Sick Children
2024

California University of Pennsylvania
2024

α-Synuclein has been centrally implicated in neurodegenerative disease, and a normal function developmental synaptic plasticity suggested by studies songbirds. A variety of observations suggest the protein partitions between membrane cytosol, behavior apparently conferred conserved structural similarity to exchangeable apolipoproteins. Here we show that capacity bind lipids is broadly distributed across exons 3, 4, 5 (encoding residues 1–102). Binding phosphatidylserine-containing vesicles...

10.1074/jbc.m004851200 article EN cc-by Journal of Biological Chemistry 2000-11-01

<h3>Objectives:</h3> While plasma biomarkers have been proposed to aid in the clinical diagnosis of Alzheimer disease (AD), few validated independent patient cohorts. Here we aim determine associated with AD 2 cohorts and validate findings multicenter Alzheimer9s Disease Neuroimaging Initiative (ADNI). <h3>Methods:</h3> Using a targeted proteomic approach, measured levels 190 proteins peptides 600 participants from centers (University Pennsylvania, Philadelphia; Washington University, St....

10.1212/wnl.0b013e318266fa70 article EN Neurology 2012-08-02
Antoine Drieu Siling Du Steffen E. Storck Justin Rustenhoven Zachary Papadopoulos and 95 more Taitea Dykstra Fenghe Zhong Kyungdeok Kim Susan Blackburn Tornike Mamuladze Oscar Harari Celeste M. Karch Randall J. Bateman Richard J. Perrin Martin R. Farlow Jasmeer P. Chhatwal Jared R. Brosch Jill Buck Marty Farlow Bernardino Ghetti Sarah Adams Nicolas R. Barthélemy Tammie L.S. Benzinger Susan E. Brandon Virginia Buckles Lisa Cash Charlie Chen Jasmin Chua Carlos Cruchaga Darcy Denner Aylin Dincer Tamara Donahue Anne M. Fagan Becca Feldman Shaney Flores Erin Franklin Nelly Joseph‐Mathurin Alyssa Gonzalez Brian A. Gordon Julia Gray Emily Gremminger Alex Groves Jason Hassenstab Cortaiga Hellm Elizabeth Herries Laura Hoechst-Swisher David M. Holtzman Russ C. Hornbeck Gina Jerome Sarah Keefe Deb Koudelis Yan Li Jacob I. Marsh Rita Martinez Kwasi G. Mawuenyega Austin McCullough Eric McDade John Morris Joanne Norton Kristine Shady Wendy Sigurdson Jennifer A. Smith Peter Wang Qing Wang Chengjie Xiong Jinbin Xu Xu Xiong Ricardo Allegri Patricio Chrem Méndez Noelia Egido Aki Araki Takeshi Ikeuchi Kenji Ishii Kensaku Kasuga Jacob Bechara W. K. Brooks Peter R. Schofield Sarah Berman Sarah B. Goldberg Snežana Ikonomović William E. Klunk Oscar L. López James M. Mountz Neelesh K. Nadkarni Riddhi Patira Lori Smith Beth E. Snitz Sarah Thompson Elise A. Weamer Courtney Bodge Stephen Salloway Kathleen Carter Duc M. Duong Erik C. B. Johnson Allan I. Levey Lingyan Ping Nicholas T. Seyfried Colleen Fitzpatrick Helena C. Chui John M. Ringman

Macrophages are important players in the maintenance of tissue homeostasis1. Perivascular and leptomeningeal macrophages reside near central nervous system (CNS) parenchyma2, their role CNS physiology has not been sufficiently well studied. Given continuous interaction with cerebrospinal fluid (CSF) strategic positioning, we refer to these cells collectively as parenchymal border (PBMs). Here demonstrate that PBMs regulate CSF flow dynamics. We identify a subpopulation express high levels...

10.1038/s41586-022-05397-3 article EN cc-by Nature 2022-11-09

Alzheimer’s disease (AD) is the most common form of dementia. This neurodegenerative disorder associated with neuronal death and gliosis heavily impacting cerebral cortex. AD has a substantial but heterogeneous genetic component, presenting both Mendelian complex architectures. Using bulk RNA-seq from parietal lobes deconvolution methods, we previously reported that brains exhibiting different architecture exhibit cellular proportions. Here, sought to directly investigate brain changes in...

10.1186/s13195-019-0524-x article EN cc-by Alzheimer s Research & Therapy 2019-08-09
Erik C. B. Johnson Shijia Bian Rafi U. Haque Kathleen Carter Caroline M. Watson and 95 more Brian A. Gordon Lingyan Ping Duc M. Duong Michael P. Epstein Eric McDade Nicolas R. Barthélemy Celeste M. Karch Chengjie Xiong Carlos Cruchaga Richard J. Perrin Aliza P. Wingo Thomas S. Wingo Jasmeer P. Chhatwal Gregory S. Day James M. Noble Sarah Berman Ralph N. Martins Neill R. Graff‐Radford Peter R. Schofield Takeshi Ikeuchi Hiroshi Mori Johannes Levin Martin R. Farlow James J. Lah Christian Haass Mathias Jucker John C. Morris Tammie L.S. Benzinger Blaine R. Roberts Randall J. Bateman Anne M. Fagan Nicholas T. Seyfried Allan I. Levey Jonathan Vöglein Ricardo Allegri Patricio Chrem Méndez Ezequiel Surace Sarah Berman Snežana Ikonomović Neelesh K. Nadkarni Francisco Lopera Laura Ramírez David Aguillón Yudy Milena Leon Cláudia Ramos Diana Alzate Ana Baena Natalia Padilla Sonia Moreno Christoph Laske Elke Kuder-Buletta Susanne Gräber‐Sultan Oliver Preische Anna Hofmann Kensaku Kasuga Yoshiki Niimi Kenji Ishii Michio Senda Raquel Sánchez‐Valle Pedro Rosa‐Neto Nick C. Fox David M. Cash Jae‐Hong Lee Jee Hoon Roh Meghan Riddle William Menard Courtney Bodge Mustafa Surti Leonel Tadao Takada Víctor Javier Sánchez-González Maribel Orozco-Barajas Alison Goate Alan E. Renton Bianca Esposito Jacob Marsh Carlos Cruchaga María Victoria Fernández Gina Jerome Elizabeth Herries Jorge J. Llibre‐Guerra William S. Brooks Jacob Bechara Jason Hassenstab Erin Franklin Allison Chen Charles D. Chen Shaney Flores Nelly Friedrichsen Nancy Hantler Russ C. Hornbeck Steve Jarman Sarah Keefe Deborah Koudelis Parinaz Massoumzadeh Austin McCullough

Abstract Alzheimer’s disease (AD) pathology develops many years before the onset of cognitive symptoms. Two pathological processes—aggregation amyloid-β (Aβ) peptide into plaques and microtubule protein tau neurofibrillary tangles (NFTs)—are hallmarks disease. However, other brain processes are thought to be key mediators Aβ plaque NFT pathology. How these additional pathologies evolve over course is currently unknown. Here we show that proteomic measurements in autosomal dominant AD...

10.1038/s41591-023-02476-4 article EN cc-by Nature Medicine 2023-08-01
Chenzhong Yin Phoebe Imms Mingxi Cheng Anar Amgalan Nahian F. Chowdhury and 95 more Roy J Massett Nikhil N. Chaudhari Xinghe Chen Paul M. Thompson Paul Bogdan Andrei Irimia Michael W. Weiner Paul Aisen Ronald Petersen Michael W. Weiner Paul Aisen Ronald Petersen Clifford R. Jack William J. Jagust John Q. Trojanowki Arthur W. Toga Laurel Beckett Robert C. Green Andrew J. Saykin John C. Morris Richard J. Perrin Leslie M. Shaw Zaven S. Khachaturian María C. Carrillo William Z. Potter Lisa L. Barnes Marie Bernard Héctor Alfredo Baptista González Carole Ho John K. Hsiao Jonathan Jackson Eliezer Masliah Donna Masterman Ozioma C. Okonkwo Richard J. Perrin Laurie Ryan Nina Silverberg Adam Fleisher Eli Lilly Michael W. Weiner Diana Truran Sacrey Juliet Fockler Cat Conti Dallas P. Veitch John Neuhaus Chengshi Jin Rachel L. Nosheny Miriam T. Ashford Derek Flenniken Adrienne Kormos Robert C. Green Tom Montine Cat Conti Ronald Petersen Paul Aisen Michael S. Rafii Rema Raman Gustavo Jiménez Michael Donohue Devon Gessert Jennifer Salazar Caileigh Zimmerman Yuliana Cabrera Sarah Walter Garrett Miller Godfrey Coker Taylor Clanton Lindsey Hergesheimer Stephanie Smith Olusegun Adegoke Payam Mahboubi Shelley Moore Jeremy Pizzola Elizabeth Shaffer Brittany Sloan Laurel Beckett Danielle Harvey Michael Donohue Clifford R. Jack Arvin Forghanian-Arani Bret Borowski Chad Ward Christopher G. Schwarz David Jones Jeff Gunter Kejal Kantarci Matthew L. Senjem Prashanthi Vemuri Robert I. Reid Nick C. Fox Ian B. Malone Paul M. Thompson Sophia I. Thomopoulos Talia M. Nir Neda Jahanshad

The gap between chronological age (CA) and biological brain age, as estimated from magnetic resonance images (MRIs), reflects how individual patterns of neuroanatomic aging deviate their typical trajectories. MRI-derived (BA) estimates are often obtained using deep learning models that may perform relatively poorly on new data or lack interpretability. This study introduces a convolutional neural network (CNN) to estimate BA after training the MRIs 4,681 cognitively normal (CN) participants...

10.1073/pnas.2214634120 article EN cc-by-nc-nd Proceedings of the National Academy of Sciences 2023-01-03

Genetic studies of Alzheimer disease (AD) have prioritized variants in genes related to the amyloid cascade, lipid metabolism, and neuroimmune modulation. However, cell-specific effect these is not fully understood. Here, we perform single-nucleus RNA-sequencing (snRNA-seq) on nearly 300,000 nuclei from parietal cortex AD autosomal dominant (APP PSEN1) risk-modifying variant (APOE, TREM2 MS4A) carriers. Within individual cell types, capture commonly dysregulated across groups. specific...

10.1038/s41467-023-37437-5 article EN cc-by Nature Communications 2023-04-21

Proteomic studies for Alzheimer’s disease (AD) are instrumental in identifying AD pathways but often focus on single tissues and sporadic cases. Here, we present a proteomic study analyzing 1305 proteins brain tissue, cerebrospinal fluid (CSF), plasma from patients with AD, TREM2 risk variant carriers, autosomal dominant (ADAD), healthy individuals. We identified 8 brain, 40 CSF, 9 that were altered individuals replicated these findings several external datasets. signature differentiated...

10.1126/scitranslmed.abq5923 article EN Science Translational Medicine 2023-07-05

Abstract The defining feature of Parkinson disease (PD) and Lewy body dementia (LBD) is the accumulation alpha-synuclein (Asyn) fibrils in bodies neurites. Here we develop validate a method to amplify Asyn extracted from LBD postmortem tissue samples use solid state nuclear magnetic resonance (SSNMR) studies determine atomic resolution structure. Amplified comprise mixture single protofilament two with very low twist. fold highly similar determined by recent cryo-electron microscopy study...

10.1038/s41467-024-46832-5 article EN cc-by Nature Communications 2024-03-29

Abstract Triggering receptor expressed on myeloid cells 2 (TREM2) plays a critical role in microglial activation, survival, and apoptosis, as well Alzheimer’s disease (AD) pathogenesis. We previously reported the MS4A locus key modulator for soluble TREM2 (sTREM2) cerebrospinal fluid (CSF). To identify additional novel genetic modifiers of sTREM2, we performed largest genome-wide association study (GWAS) identified four loci CSF sTREM2 3,350 individuals European ancestry. Through...

10.1186/s13024-023-00687-4 article EN cc-by Molecular Neurodegeneration 2024-01-03

Abstract INTRODUCTION Alzheimer's disease (AD) pathology is defined by β‐amyloid (Aβ) plaques and neurofibrillary tau, but Lewy bodies (LBs; 𝛼‐synuclein aggregates) are a common co‐pathology for which effective biomarkers needed. METHODS A validated α‐synuclein Seed Amplification Assay (SAA) was used on recent cerebrospinal fluid (CSF) samples from 1638 Disease Neuroimaging Initiative (ADNI) participants, 78 with LB‐pathology confirmation at autopsy. We compared SAA outcomes neuropathology,...

10.1002/alz.13858 article EN cc-by-nc-nd Alzheimer s & Dementia 2024-05-21
Jorge J. Llibre‐Guerra María Victoria Fernández Nelly Joseph‐Mathurin Shijia Bian Kathleen Carter and 95 more Yan Li Andrew J. Aschenbrenner Cyril Pottier Wendy Sigurdson Eric McDade Brian A. Gordon Alan E. Renton Tammie L.S. Benzinger Laura Ibáñez Nicole Barthélémy Matthew P. Johnson Jason Hassenstab Guoqiao Wang Alison Goate Daniel Western Ciyang Wang Diana A. Hobbs Alisha Daniels Celeste M. Karch John C. Morris Carlos Cruchaga Erik C. B. Johnson Randall J. Bateman David Aguillón Ricardo Allegri Ana Baena Bryce Baker Jessica Banks Nicolas R. Barthélemy Jamie Bartzel Randall J. Bateman Jacob Bechara Sarah Berman Yamile Bocanegra William S. Brooks David M. Cash Allison Chen Charles Chen Jasmeer P. Chhatwal Patricio Chrem Méndez Laura Courtney Alisha Daniels Gregory S. Day Emma Devenney Anne M. Fagan Martin R. Farlow Shaney Flores Nick C. Fox Erin Franklin Brian Fulton‐Howard Manu S. Goyal Susanne Gräber‐Sultan Neill R. Graff‐Radford Emily Gremminger Cortaiga Hellm David M. Holtzman Russ C. Hornbeck Edward D. Huey Laura Ibáñez Takeshi Ikeuchi Snežana Ikonomović Takanobu Ishiguro Kenji Ishii Kelley Jackson Gina Jerome Mathias Jucker Celeste M. Karch Kensaku Kasuga Sarah Keefe Deborah Koudelis Elke Kuder-Buletta Christian la Fougère Christoph Laske Jae Hong Lee Allan I. Levey Johannes Levin Yudy Milena Leon Francisco Lopera Ruijin Lu Courtney Maa Jacob Marsh Mariana Martin Ralph N. Martins Parinaz Massoumzadeh Colin L. Masters Austin McCullough Nicole S. McKay Matthew Minton Hiroshi Mori Joyce Nicklaus Yu-zheng Nie Yoshiki Niimi James M. Noble Ulrike Obermueller Richard J. Perrin

10.1038/s41591-025-03494-0 article EN Nature Medicine 2025-02-10

Importance The ability to predict the onset of mild cognitive impairment (MCI) and Alzheimer dementia (AD) could allow older adults clinicians make informed decisions about care. Objective To assess whether age at MCI AD can be predicted using a statistical modeling approach. Design, Setting, Participants This prognostic study used data from 2 aging cohort studies—the Australian Imaging, Biomarker Lifestyle (AIBL) Alzheimer’s Disease Neuroimaging Initiative (ADNI)—for model development...

10.1001/jamanetworkopen.2024.53756 article EN cc-by-nc-nd JAMA Network Open 2025-01-08

Abstract We present a comprehensive global analysis of genetic variants associated with autosomal-dominant Alzheimer's disease (ADAD). A total 550 in the APP, PSEN1, and PSEN2 genes were identified, which 279 classified as pathogenic or likely based on ACMG-AMP criteria, utilizing data from Dominantly Inherited Alzheimer Network (DIAN), literature, public databases. Symptomatic age at onset (AAO) was estimated for 227 these variants, allowing detailed characterization their frequency,...

10.1093/brain/awaf038 article EN cc-by-nc Brain 2025-02-04

Detergent-stable multimers of alpha-synuclein have been found specifically in the brains patients with Parkinson's disease and other neurodegenerative diseases. Here we show that recombinant forms vitro upon exposure to vesicles containing certain polyunsaturated fatty acid (PUFA) acyl groups, including arachidonoyl docosahexaenoyl. This process occurs at physiological concentrations much faster than aqueous solution. PUFA-induced aggregation involves physical association vesicle surface via...

10.1074/jbc.m105022200 article EN cc-by Journal of Biological Chemistry 2001-11-01
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