Jesper B. Andersen

ORCID: 0000-0003-1760-5244
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About
Contact & Profiles
Research Areas
  • Cholangiocarcinoma and Gallbladder Cancer Studies
  • Cancer, Hypoxia, and Metabolism
  • RNA modifications and cancer
  • Cancer-related molecular mechanisms research
  • MicroRNA in disease regulation
  • Cancer, Lipids, and Metabolism
  • Pancreatic and Hepatic Oncology Research
  • Epigenetics and DNA Methylation
  • Cancer Genomics and Diagnostics
  • Peptidase Inhibition and Analysis
  • Liver physiology and pathology
  • Liver Disease Diagnosis and Treatment
  • Hepatocellular Carcinoma Treatment and Prognosis
  • Cancer Cells and Metastasis
  • Amino Acid Enzymes and Metabolism
  • Ubiquitin and proteasome pathways
  • Pediatric Hepatobiliary Diseases and Treatments
  • Biochemical Acid Research Studies
  • Cancer-related gene regulation
  • Genetic factors in colorectal cancer
  • interferon and immune responses
  • Drug Transport and Resistance Mechanisms
  • RNA Research and Splicing
  • Gallbladder and Bile Duct Disorders
  • Protein Degradation and Inhibitors

University of Copenhagen
2016-2025

Loma Linda University
2022

Fudan University
2021

Centre de Nanosciences et de Nanotechnologies
2021

IT University of Copenhagen
2020-2021

Huashan Hospital
2021

Peking Union Medical College Hospital
2018

Chinese Academy of Medical Sciences & Peking Union Medical College
2018

The University of Texas MD Anderson Cancer Center
2018

National Institutes of Health
2009-2016

Farshad Farshidfar Siyuan Zheng Marie‐Claude Gingras Yulia Newton Juliann Shih and 95 more A. Gordon Robertson Toshinori Hinoue Katherine A. Hoadley Ewan A. Gibb Jason Roszik Kyle Covington Chia-Chin Wu Eve Shinbrot Nicolas Stransky Apurva M. Hegde Ju Dong Yang Ed Reznik Sara Sadeghi Chandra Sekhar Pedamallu Akinyemi I. Ojesina Julian M. Hess J. Todd Auman Suhn K. Rhie Reanne Bowlby Mitesh J. Borad Andrew X. Zhu Joshua M. Stuart Chris Sander Rehan Akbani Andrew D. Cherniack Vikram Deshpande Taofic Mounajjed Wai Chin Foo Michael Torbenson David E. Kleiner Peter W. Laird David A. Wheeler Autumn J. McRee Oliver F. Bathe Jesper B. Andersen Nabeel Bardeesy Lewis R. Roberts Lawrence N. Kwong Rehan Akbani Loretta K. Allotey Adrian Ally Domenico Alvaro Jesper B. Andersen Elizabeth L. Appelbaum Arshi Arora J. Todd Auman Miruna Balasundaram Saianand Balu Nabeel Bardeesy Oliver F. Bathe Stephen B. Baylin Rameen Beroukhim Mario Berríos Tom Bodenheimer Lori Boice Arnoud Boot Mitesh J. Borad Jay Bowen Reanne Bowlby Maria Consiglia Bragazzi Denise Brooks Vincenzo Cardinale Rebecca Carlsen Guido Carpino André Lopes Carvalho Roongruedee Chaiteerakij Vishal C. Chandan Andrew D. Cherniack Lynda Chin Juok Cho Gina Choe Eric Chuah Sudha Chudamani Carrie Cibulskis Matthew G. Cordes Kyle Covington Daniel Crain Erin Curley Agostino Maria De Rose Timothy Defreitas John A. Demchok Vikram Deshpande Noreen Dhalla Li Ding Kimberley Evason Farshad Farshidfar Ina Felau Martin L. Ferguson Wai Chin Foo Antonio Franchitto Scott Frazer Catrina C. Fronick Lucinda A. Fulton Robert S. Fulton Stacey Gabriel

Cholangiocarcinoma (CCA) is an aggressive malignancy of the bile ducts, with poor prognosis and limited treatment options. Here, we describe integrated analysis somatic mutations, RNA expression, copy number, DNA methylation by The Cancer Genome Atlas a set predominantly intrahepatic CCA cases propose molecular classification scheme. We identified IDH mutant-enriched subtype distinct features including low expression chromatin modifiers, elevated mitochondrial genes, increased number....

10.1016/j.celrep.2017.02.033 article EN cc-by Cell Reports 2017-03-01

Hepatocellular carcinoma (HCC) is among the leading causes of cancer-related death. Despite advances in diagnosis and management HCC, biology this tumor remains poorly understood. Recent evidence highlighted long noncoding RNAs (lncRNAs) as crucial determinants HCC development. In study we report lncRNA HOXA transcript at distal tip (HOTTIP) significantly up-regulated specimens. The HOTTIP gene located physical contiguity with HOXA13 directly controls locus expression by way interaction...

10.1002/hep.26740 article EN Hepatology 2013-10-11

Intrahepatic cholangiocellular carcinoma (ICC) is the second most common type of primary liver cancer. However, its tumor heterogeneity and molecular characteristics are largely unknown. In this study, we conducted transcriptomic profiling 23 ICC combined hepatocellular cholangiocarcinoma specimens from Asian patients using Affymetrix messenger RNA (mRNA) NanoString microRNA microarrays to search for unique gene signatures linked subtypes patient prognosis. We validated in an additional 68...

10.1002/hep.25890 article EN Hepatology 2012-06-18

Cholangiocarcinoma (CCA) is a rare and heterogeneous biliary cancer, whose incidence related mortality increasing. This study investigates the clinical course of CCA subtypes (intrahepatic [iCCA], perihilar [pCCA], distal [dCCA]) in pan-European cohort.The ENSCCA Registry multicenter observational study. Patients were included if they had histologically proven diagnosis between 2010-2019. Demographic, histomorphological, biochemical, studies performed.Overall, 2,234 patients enrolled...

10.1016/j.jhep.2021.12.010 article EN cc-by-nc-nd Journal of Hepatology 2022-02-12

Hepatocellular carcinoma (HCC) is the third cancer killer worldwide with >600,000 deaths every year. Although major risk factors are known, therapeutic options in patients remain limited part because of our incomplete understanding cellular and molecular mechanisms influencing HCC development. Evidence indicates that retinoblastoma (RB) pathway functionally inactivated most cases by genetic, epigenetic, and/or viral mechanisms. To investigate functional relevance this observation, we...

10.1084/jem.20110198 article EN The Journal of Experimental Medicine 2011-08-29

We present an integromic analysis of gene alterations that modulate transforming growth factor β (TGF-β)-Smad-mediated signaling in 9,125 tumor samples across 33 cancer types The Cancer Genome Atlas (TCGA). Focusing on genes encode mediators and regulators TGF-β signaling, we found at least one genomic alteration (mutation, homozygous deletion, or amplification) 39% samples, with highest frequencies gastrointestinal cancers. identified mutation hotspots ligands (BMP5), receptors (TGFBR2,...

10.1016/j.cels.2018.08.010 article EN cc-by-nc-nd Cell Systems 2018-09-26

Abstract KRAS mutated tumours represent a large fraction of human cancers, but the vast majority remains refractory to current clinical therapies. Thus, deeper understanding molecular mechanisms triggered by oncogene may yield alternative therapeutic strategies. Here we report identification common transcriptional signature across mutant cancers distinct tissue origin that includes transcription factor FOSL1. High FOSL1 expression identifies lung and pancreatic cancer patients with worst...

10.1038/ncomms14294 article EN cc-by Nature Communications 2017-02-21

Human hepatocellular carcinoma (HCC) is a heterogeneous disease of distinct clinical subgroups. A principal source tumor heterogeneity may be cell type origin, which in liver includes hepatocyte or adult stem/progenitor cells. To address this issue, we investigated the molecular mechanisms underlying fate enzyme-altered preneoplastic lesions resistant (RH) model. Sixty samples classified as focal lesions, adenoma, and early advanced HCCs were microdissected after morphological...

10.1002/hep.23488 article EN Hepatology 2009-12-04
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