Carlos Frederico Martins Menck

ORCID: 0000-0003-1941-0694
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About
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Research Areas
  • DNA Repair Mechanisms
  • Carcinogens and Genotoxicity Assessment
  • CRISPR and Genetic Engineering
  • Skin Protection and Aging
  • bioluminescence and chemiluminescence research
  • Metabolism and Genetic Disorders
  • Virus-based gene therapy research
  • DNA and Nucleic Acid Chemistry
  • RNA Interference and Gene Delivery
  • Light effects on plants
  • Mitochondrial Function and Pathology
  • Bone and Dental Protein Studies
  • Viral Infectious Diseases and Gene Expression in Insects
  • Cancer-related Molecular Pathways
  • Plant Pathogenic Bacteria Studies
  • Cancer therapeutics and mechanisms
  • Genomics and Phylogenetic Studies
  • Bacteriophages and microbial interactions
  • Photosynthetic Processes and Mechanisms
  • Bacterial Genetics and Biotechnology
  • Plant Genetic and Mutation Studies
  • Photodynamic Therapy Research Studies
  • Autophagy in Disease and Therapy
  • Pluripotent Stem Cells Research
  • Animal Genetics and Reproduction

Universidade de São Paulo
2016-2025

Institute of Biomedical Science
2005-2022

Hospital Universitário da Universidade de São Paulo
2008-2019

Fundação Carlos Chagas
2018

Instituto de Biofísica Carlos Chagas Filho
2018

Universidade Federal do Rio de Janeiro
2004-2018

Nobel Foundation
2015

Universidade Federal de São Paulo
2015

Mendelics
2015

Ciência Viva
2015

10.1038/417459a article EN Nature 2002-05-01
Vishvanath Nene Jennifer R. Wortman Daniel Lawson Brian J. Haas Chinnappa D. Kodira and 90 more Zhijian Tu Brendan Loftus Zhiyong Xi Karyn Mégy Manfred Grabherr Quinghu Ren Evgeny M. Zdobnov Neil F. Lobo Kathryn S. Campbell Susan E. Brown Maria F. Bonaldo Jinsong Zhu Steven P. Sinkins David G. Hogenkamp Paolo Amedeo Peter Arensburger Peter W. Atkinson Shelby Bidwell Jim Biedler Ewan Birney Robert V. Bruggner Javier Costas Monique R. Coy Jonathan Crabtree Matt Crawford Becky deBruyn David DeCaprio Karin Eiglmeier Eric Eisenstadt Hamza A. El-Dorry William M Gelbart Suely Lopes Gomes M. Hammond Linda I. Hannick James R. Hogan Michael H. Holmes David B. Jaffe J. Spencer Johnston Ryan Kennedy Hean Koo Saul Kravitz Evgenia V. Kriventseva David Kulp Kurt LaButti Eduardo Lee Li Song Diane D. Lovin Chunhong Mao Evan Mauceli Carlos Frederico Martins Menck Jason Miller Philip Montgomery Akio Mori Ana L. T. O. Nascimento Horacio Naveira Chad Nusbaum Sinéad B. O'Leary Joshua Orvis Mihaela Pertea Hadi Quesneville Kyanne R. Reidenbach Yu-Hui Rogers Charles W. Roth Jennifer R. Schneider Michael C. Schatz Martin Shumway Mario Stanke E. O. Stinson José M. C. Tubío Janice P. VanZee Sergio Verjovski‐Almeida Doreen Werner Owen White Stefan Wyder Qiandong Zeng Qi Zhao Yongmei Zhao Catherine A. Hill Alexander S. Raikhel Marcelo B. Soares D. L. Knudson Norman H. Lee James E. Galagan Steven L. Salzberg Ian T. Paulsen George Dimopoulos Frank H. Collins Bruce Birren Claire M. Fraser David W. Severson

We present a draft sequence of the genome Aedes aegypti, primary vector for yellow fever and dengue fever, which at approximately 1376 million base pairs is about 5 times size malaria Anopheles gambiae. Nearly 50% Ae. aegypti consists transposable elements. These contribute to factor 4 6 increase in average gene length sizes intergenic regions relative An. gambiae Drosophila melanogaster. Nonetheless, chromosomal synteny generally maintained among all three insects, although conservation...

10.1126/science.1138878 article EN Science 2007-05-18
Andrew J.G. Simpson Fernando C. Reinach Paulo Arruda Fátima Abreu-Salinas Márcio Luís Acencio and 95 more Renato Alvarenga Lúcia Maria Carareto Alves Jorge E. Araya Gilson S. Baía Cassio Silva Baptista Mário H. Barros Eric D. Bonaccorsi Silvana Bordin J.M. Bové Marcelo R. S. Briones M. R. P. Bueno Anamaria A. Camargo Luís Eduardo Aranha Camargo Dirce Maria Carraro Helaine Carrer Nelson Barros Colauto Carlos Augusto Colombo Fernando Ferreira Costa María Costa Claudio M. Costa‐Neto Luiz Lehmann Coutinho M Cristofani Emmanuel Dias‐Neto Cássia Docena Hamza A. El-Dorry Agda Paula Facincani Ari J. S. Ferreira Vera C. A. Ferreira Jesus Aparecido Ferro Joana S. Fraga Suzelei de Castro França M. C. Franco Marcus Frohme Luiz Roberto Furlan M. Garnier Gustavo H. Goldman Maria Helena S. Goldman Suely Lopes Gomes Arthur Gruber Paulo Lee Ho Jörg D. Hoheisel Maria Luiza Junqueira Edson L. Kemper João Paulo Kitajima José Eduardo Krieger Eiko E. Kuramae Frédéric Laigret Márcio Rodrigues Lambais Luciana C. C. Leite Eliana Gertrudes de Macedo Lemos Manoel Victor Franco Lemos S. A. Lopes Catalina Romero Lopes Josias Alves Machado Marcos Antônio Machado A. M. B. N. Madeira Humberto Maciel França Madeira Celso Luís Marino Marilis V. Marques Elizabeth A. L. Martins Eliane Maurício Furtado Martins Adriana Yamaguti Matsukuma Carlos Frederico Martins Menck Elisabete Miracca Cristina Yumi Miyaki Cláudia Barros Monteiro-Vitorello David H. Moon María Aparecida Nagai Ana L. T. O. Nascimento L.E.S. Netto A. Nhani F. G. Nóbrega Luiz R. Nunes Marcos Antônio de Oliveira Marcos Antônio de Oliveira Regina Costa de Oliveira Darío Abel Palmieri A. Paris Bernardo R. Peixoto Gonçalo Amarante Guimarães Pereira Haroldo Alves Pereira João Bosco Pesquero Ronaldo Quaggio Patrícia G. Roberto V. Rodrigues Artur J.M. Rosa Vicente E. De Rosa Renata Guerra de Sá R. V. Santelli Haiko E Sawasaki A. C. R. da Silva Aline Maria da Silva Felipe Rodrigues da Silva Wilson A. Silva J. F. da Silveira

10.1038/35018003 article EN Nature 2000-07-13

Leptospira species colonize a significant proportion of rodent populations worldwide and produce life-threatening infections in accidental hosts, including humans. Complete genome sequencing interrogans serovar Copenhageni comparative analysis with the available Lai reveal that despite overall genetic similarity there are structural differences, large chromosomal inversion extensive variation number distribution insertion sequence elements. Genome elucidates many novel aspects leptospiral...

10.1128/jb.186.7.2164-2172.2004 article EN Journal of Bacteriology 2004-03-17

The down-regulation of the tumor-suppressor gene RASSF1A has been shown to increase cell proliferation in several tumors. expression is regulated through epigenetic events involving polycomb repressive complex 2 (PRC2); however, molecular mechanisms modulating recruitment this modifier RASSF1 locus remain largely unknown. Here, we identify and characterize ANRASSF1, an endogenous unspliced long noncoding RNA (lncRNA) that transcribed from opposite strand on lines tissues binds PRC2. ANRASSF1...

10.1371/journal.pgen.1003705 article EN cc-by PLoS Genetics 2013-08-22

Abstract Malignant glioma is a severe type of brain tumor with poor prognosis and few options for therapy. The main chemotherapy protocol this based on temozolomide (TMZ), albeit limited success. Cisplatin widely used to treat several types and, in association TMZ, also recurrent glioma. However, mechanisms cellular resistance cisplatin restrict therapy efficiency. In that sense, enhanced DNA repair, high glutathione levels functional p53 have critical role resistance. work, we explored...

10.1038/cddis.2014.465 article EN cc-by Cell Death and Disease 2014-10-30

Cancer is a leading cause of death worldwide, and while great advances have been made particularly in chemotherapy, many types cancer still present dismal prognosis. In the case glioma, temozolomide (TMZ) main option for treatment, but it has limited success due to drug resistance. While this resistance usually associated DNA repair mechanisms, work we demonstrate that oxidative stress plays an important role. We showed upon TMZ treatment there induction nuclear factor erythroid 2-related 2...

10.18632/oncotarget.10129 article EN Oncotarget 2016-06-17

Most of the studies on air pollution focus emissions from fossil fuel burning in urban centers. However, approximately half world's population is exposed to caused by biomass emissions. In Brazilian Amazon population, over 10 million people are directly high levels pollutants resulting deforestation and agricultural fires. This work first study present an integrated view effects inhalable particles burning. Exposing human lung cells particulate matter smaller than µm (PM

10.1038/s41598-017-11024-3 article EN cc-by Scientific Reports 2017-09-01

Lung cancer patients face a dismal prognosis mainly due to the low efficacy of current available treatments. Cisplatin is first-line chemotherapy treatment for those patients, however, resistance this drug common and yet not fully understood phenomenon. Aiming shed new light into puzzle, we used established normal malignant lung cell lines displaying different sensitivity towards cisplatin treatment. We observed negative correlation between viability DNA damage induction upon Interestingly,...

10.1038/s41598-019-54065-6 article EN cc-by Scientific Reports 2019-11-27

Chaperone-mediated autophagy (CMA), a selective form of protein lysosomal degradation, is maximally activated in stress situations to ensure maintenance cellular homeostasis. CMA activity decreases with age and several human chronic disorders, but contrast, most cancer cells, upregulated required for tumor growth. However, the role malignant transformation remains unknown. In this study, we demonstrate that inhibition fibroblasts augments efficiency MYC/c-Myc-driven transformation. blockage...

10.1080/15548627.2017.1293767 article EN Autophagy 2017-04-14

Air pollution represents a considerable threat to health worldwide. The São Paulo Metropolitan area, in Brazil, has unique composition of atmospheric pollutants with population nearly 20 million people and 9 passenger cars. It is long known that exposure particulate matter less than 2.5 µm (PM2.5) can cause various effects such as DNA damage. One the most versatile defense mechanisms against accumulation damage nucleotide excision repair (NER), which includes XPC protein. However, by NER...

10.1016/j.envint.2020.106150 article EN cc-by-nc-nd Environment International 2020-10-08

Abstract Xeroderma pigmentosum (XP) is a genetic disorder caused by mutations in genes of the Nucleotide Excision Repair (NER) pathway (groups A-G) or Translesion Synthesis DNA polymerase η (V). XP associated with an increased skin cancer risk, reaching, for some groups, several thousand-fold compared to general population. Here, we analyze 38 genomes from five groups. We find that activity NER determines heterogeneity mutation rates across and transcription-coupled extends beyond gene...

10.1038/s41467-023-38311-0 article EN cc-by Nature Communications 2023-05-04

The genome sequence of Leifsonia xyli subsp. xyli, which causes ratoon stunting disease and affects sugarcane worldwide, was determined. single circular chromosome CTCB07 2.6 Mb in length with a GC content 68% 2,044 predicted open reading frames. analysis also revealed 307 pseudogenes, is more than any bacterial plant pathogen sequenced to date. Many these if functional, would likely be involved the degradation heteropolysaccharides, uptake free sugars, synthesis amino acids. Although L. has...

10.1094/mpmi.2004.17.8.827 article EN other-oa Molecular Plant-Microbe Interactions 2004-08-01
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