Wim Timens

ORCID: 0000-0002-4146-6363
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About
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Research Areas
  • Chronic Obstructive Pulmonary Disease (COPD) Research
  • Asthma and respiratory diseases
  • Neonatal Respiratory Health Research
  • Lung Cancer Treatments and Mutations
  • Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis
  • Immunotherapy and Immune Responses
  • Pediatric health and respiratory diseases
  • RNA modifications and cancer
  • Cancer Immunotherapy and Biomarkers
  • Monoclonal and Polyclonal Antibodies Research
  • IL-33, ST2, and ILC Pathways
  • Cancer-related molecular mechanisms research
  • Cancer Genomics and Diagnostics
  • Respiratory Support and Mechanisms
  • Lung Cancer Diagnosis and Treatment
  • Respiratory and Cough-Related Research
  • Lung Cancer Research Studies
  • Pulmonary Hypertension Research and Treatments
  • Inhalation and Respiratory Drug Delivery
  • Immune Cell Function and Interaction
  • Medical Imaging and Pathology Studies
  • Epigenetics and DNA Methylation
  • Genetic Associations and Epidemiology
  • MicroRNA in disease regulation
  • Pleural and Pulmonary Diseases

University Medical Center Groningen
2016-2025

University of Groningen
2016-2025

Institute for Asthma and Allergy
2013-2024

Dialyse Centrum Groningen
1996-2024

International Association for the Study of Lung Cancer
2024

Rijnstate Hospital
2024

Metropolitan University
2019

Hospital for Sick Children
2018

University of British Columbia
2012-2018

St. Paul's Hospital
2018

Severe acute respiratory syndrome (SARS) is an infectious disease that spreads mainly via the route. A distinct coronavirus (SARS-CoV) has been identified as aetiological agent of SARS. Recently, a metallopeptidase named angiotensin-converting enzyme 2 (ACE2) functional receptor for SARS-CoV. Although ACE2 mRNA known to be present in virtually all organs, its protein expression largely unknown. Since identifying possible route infection major implications understanding pathogenesis and...

10.1002/path.1570 article EN The Journal of Pathology 2004-05-07
Martin Peifer Lynnette Fernández-Cuesta Martin L. Sos Julie George Danila Seidel and 88 more Lawryn H. Kasper Dennis Plenker Frauke Leenders Ruping Sun Thomas Zander Roopika Menon Mirjam Koker Ilona Dahmen Christian Müller Vincenzo Di Cerbo Hans‐Ulrich Schildhaus Janine Altmüller Ingelore Baessmann Christian Becker Bram De Wilde Jo Vandesompele Diana Böhm Sascha Ansén Franziska Gabler Ines Wilkening Stefanie Heynck Johannes M. Heuckmann Xin Lü Scott L. Carter Kristian Cibulskis Shantanu Banerji Gad Getz Kwon-Sik Park Daniel Rauh Christian Grütter Matthias Fischer Laura Pasqualucci Gavin Wright Zoe Wainer Prudence A. Russell Iver Petersen Yuan Chen Erich Stoelben Corinna Ludwig Philipp A. Schnabel Hans Hoffmann Thomas Muley Michael Brockmann Walburga Engel-Riedel Lucia Anna Muscarella Vito Michele Fazio Harry J.M. Groen Wim Timens Hannie Sietsma Erik Thunnissen Egbert F. Smit Daniëlle A.M. Heideman Peter J.F. Snijders Federico Cappuzzo Claudia Ligorio Stefania Damiani John K. Field Steinar Solberg Odd Terje Brustugun Marius Lund‐Iversen Jörg Sänger Joachim H. Clement Alex Soltermann Holger Moch Walter Weder Benjamin Solomon Jean‐Charles Soria Pierre Validire Benjamin Besse Élisabeth Brambilla Christian Brambilla Sylvie Lantuéjoul Philippe Lorimier Peter M. Schneider Michael Hallek William Pao Matthew Meyerson Julien Sage Jay Shendure Robert C. Schneider Reinhard Büttner Jürgen Wolf Peter Nürnberg Sven Perner Lukas C. Heukamp Paul K. Brindle Stefan A. Haas Roman K. Thomas

10.1038/ng.2396 article EN Nature Genetics 2012-09-02

The use of multidetector computed tomography (CT) in lung-cancer screening trials involving subjects with an increased risk lung cancer has highlighted the problem for clinician deciding on best course action when noncalcified pulmonary nodules are detected by CT.A total 7557 participants underwent CT years 1, 2, and 4 a randomized trial screening. We used software to evaluate nodule according its volume or volume-doubling time. Growth was defined as increase at least 25% between two scans....

10.1056/nejmoa0906085 article EN New England Journal of Medicine 2009-12-02

While genomically targeted therapies have improved outcomes for patients with lung adenocarcinoma, little is known about the genomic alterations which drive squamous cell cancer. Sanger sequencing of tyrosine kinome identified mutations in DDR2 kinase gene 3.8% cancers and lines. Squamous cancer lines harboring were selectively killed by knock-down RNAi or treatment multi-targeted inhibitor dasatinib. Tumors established from a mutant line sensitive to dasatinib xenograft models. Expression...

10.1158/2159-8274.cd-11-0005 article EN Cancer Discovery 2011-04-08
Danila Seidel Thomas Zander Lukas C. Heukamp Martin Peifer Marc Bos and 95 more Lynnette Fernández-Cuesta Frauke Leenders Xin Lü Sascha Ansén Masyar Gardizi Chau Nguyen Johannes Berg Prudence A. Russell Zoe Wainer Hans‐Ulrich Schildhaus Toni-Maree Rogers Benjamin Solomon William Pao Scott L. Carter Gad Getz D. Neil Hayes Matthew D. Wilkerson Erik Thunnissen William D. Travis Sven Perner Gavin Wright Élisabeth Brambilla Reinhard Buettner Juergen Wolf Roman K. Thomas Franziska Gabler Ines Wilkening Christian Mueller Ilona Dahmen Roopika Menon Katharina Koenig Kerstin Albus Sabine Merkelbach‐Bruse Jana Fassunke Katja Schmitz Helen Kuenstlinger Michaela Angelika Kleine Elke Binot Silvia Querings Janine Altmueller Ingelore Boessmann Peter Nuemberg Peter M. Schneider Magdalena Bogus Alex Soltermann Holger Moch Odd Terje Brustugun Steinar Solberg Marius Lund‐Iversen Åslaug Helland Thomas Muley Hans Hoffmann Philipp A. Schnabel Yuan Chen Harry J.M. Groen Wim Timens Hannie Sietsma Joachim H. Clement Walter Weder Joerg Saenger Erich Stoelben Corinna Ludwig Walburga Engel-Riedel Egbert F. Smit Danille A. M. Heideman Peter J.F. Snijders Lucia Nogová Martin L. Sos Christian Mattonet Karin Toepelt Matthias Scheffler Eray Goekkurt Rainer Kappes Stefan Krueger Kato Kambartel Dirk Behringer Wolfgang Schulte Wolfgang Galetke Winfried Randerath Matthias Heldwein Andreas Schlesinger Monika Serke Khosro Hekmat Konrad Frank Roland Schnell Marcel Reiser Ali-Nuri Huenerlituerkoglu Stephan Schmitz Lisa Meffert Yon‐Dschun Ko Markus Litt-Lampe Ulrich Gerigk Rainer Fricke Benjamin Besse Christian Brambilla

The pattern of mutations in human lung cancer differs by tumor subtype and is a useful addition to histology for selecting targeted therapy improving patient survival.

10.1126/scitranslmed.3006802 article EN Science Translational Medicine 2013-10-30
Lisa Sikkema Ciro Ramírez-Suástegui Daniel Strobl Tessa E. Gillett Luke Zappia and 92 more Elo Madissoon Nikolay S. Markov Laure‐Emmanuelle Zaragosi Yuge Ji Meshal Ansari Marie‐Jeanne Arguel Leonie Apperloo Martin Banchero Christophe Bécavin Marijn Berg Evgeny Chichelnitskiy Mei-I Chung Antoine Collin Aurore Gay Janine Gote-Schniering Baharak Hooshiar Kashani Kemal İnecik Manu Jain Theodore S. Kapellos Tessa Kole Sylvie Leroy Christoph H. Mayr Amanda J. Oliver Michael von Papen Lance Peter Chase J. Taylor Thomas Walzthoeni Chuan Xu Linh T. Bui Carlo De Donno Leander Dony Alen Faiz Minzhe Guo Austin J. Gutierrez Lukas Heumos Ni Huang Ignacio L. Ibarra Nathan D. Jackson Preetish Kadur Lakshminarasimha Murthy Mohammad Lotfollahi Tracy Tabib Carlos Talavera‐López Kyle J. Travaglini Anna Wilbrey-Clark Kaylee B. Worlock Masahiro Yoshida Yuexin Chen James S. Hagood Ahmed Agami Péter Horváth Joakim Lundeberg Charles‐Hugo Marquette Gloria Pryhuber Chistos Samakovlis Xin Sun Lorraine B. Ware Kun Zhang Maarten van den Berge Yohan Bossé Tushar Desai Oliver Eickelberg Naftali Kaminski Mark A. Krasnow Robert Lafyatis Marko Nikolić Joseph E. Powell Jayaraj Rajagopal Mauricio Rojas Orit Rozenblatt–Rosen Max A. Seibold Dean Sheppard Douglas P. Shepherd Don D. Sin Wim Timens Alexander M. Tsankov Jeffrey A. Whitsett Yan Xu Nicholas E. Banovich Pascal Barbry Thu Elizabeth Duong Christine S. Falk Kerstin B. Meyer Jonathan A. Kropski Dana Pe’er Herbert B. Schiller Purushothama Rao Tata Joachim L. Schultze Sara A. Teichmann Alexander V. Misharin Martijn C. Nawijn Malte D. Luecken Fabian J. Theis

Single-cell technologies have transformed our understanding of human tissues. Yet, studies typically capture only a limited number donors and disagree on cell type definitions. Integrating many single-cell datasets can address these limitations individual the variability present in population. Here we integrated Human Lung Cell Atlas (HLCA), combining 49 respiratory system into single atlas spanning over 2.4 million cells from 486 individuals. The HLCA presents consensus re-annotation with...

10.1038/s41591-023-02327-2 article EN cc-by Nature Medicine 2023-06-01

Genome-wide association studies (GWAS) have identified loci reproducibly associated with pulmonary diseases; however, the molecular mechanism underlying these associations are largely unknown. The objectives of this study were to discover genetic variants affecting gene expression in human lung tissue, refine susceptibility for asthma GWAS studies, and use genetics network analyses find key drivers asthma. We performed a genome-wide search quantitative trait (eQTL) 1,111 samples. eQTL...

10.1371/journal.pgen.1003029 article EN cc-by PLoS Genetics 2012-11-29

BackgroundIdiopathic pulmonary fibrosis (IPF) is a chronic progressive lung disease with high mortality, uncertain cause, and few treatment options. Studies have identified significant genetic risk associated the development of IPF; however, mechanisms by which factors promote IPF remain unclear. We aimed to identify variants susceptibility provide mechanistic insight using gene protein expression analyses.MethodsWe used two-stage approach: genome-wide association study in patients European...

10.1016/s2213-2600(17)30387-9 article EN cc-by The Lancet Respiratory Medicine 2017-10-23

Rationale: Idiopathic pulmonary fibrosis (IPF) is a complex lung disease characterized by scarring of the that believed to result from an atypical response injury epithelium. Genome-wide association studies have reported signals implicating multiple pathways including host defense, telomere maintenance, signaling, and cell-cell adhesion.Objectives: To improve our understanding factors increase IPF susceptibility identifying previously unreported genetic associations.Methods: We conducted...

10.1164/rccm.201905-1017oc article EN cc-by American Journal of Respiratory and Critical Care Medicine 2019-11-11

Abstract Objectives In non‐small cell lung cancer (NSCLC), the immune system and possibly its composition affect survival. this in silico study, infiltrate NSCLC patients was evaluated. Methods Gene expression data of tumors from early were obtained Expression Omnibus (GEO). With CIBERSORT, 22 fractions estimated. Results The 1430 pretreatment contained mostly plasma cells, macrophages CD8 T cells. Higher resting mast CD4 T‐helper cells associated with longer overall survival (OS) (HR =...

10.1002/cti2.1142 article EN cc-by Clinical & Translational Immunology 2020-01-01

Abstract To identify candidate causal genes of asthma, we performed a genome-wide association study (GWAS) in UK Biobank on broad asthma definition (n = 56,167 cases and 352,255 controls). We then carried out functional mapping through transcriptome-wide studies (TWAS) Mendelian randomization lung 1,038) blood 31,684) tissues. The GWAS reveals 72 asthma-associated loci from 116 independent significant variants (P < 5.0E-8). most TWAS gene 17q12-q21 is GSDMB 1.42E-54). Other include TSLP...

10.1038/s42003-021-02227-6 article EN cc-by Communications Biology 2021-06-08

Immune checkpoint inhibitors (ICIs), by reinvigorating CD8+ T cell mediated immunity, have revolutionized cancer therapy. Yet, the systemic distribution, a potential biomarker of ICI response, remains poorly characterized. We assessed safety, imaging dose and timing, pharmacokinetics immunogenicity zirconium-89-labeled, CD8-specific, one-armed antibody positron emission tomography tracer 89ZED88082A in patients with solid tumors before ~30 days after starting therapy (NCT04029181). No...

10.1038/s41591-022-02084-8 article EN cc-by Nature Medicine 2022-12-01
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