Rui Yang

ORCID: 0000-0003-4427-2158
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About
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Research Areas
  • Immune Cell Function and Interaction
  • Immunodeficiency and Autoimmune Disorders
  • T-cell and B-cell Immunology
  • Cancer-related molecular mechanisms research
  • Liver Disease Diagnosis and Treatment
  • Diabetes and associated disorders
  • Mycobacterium research and diagnosis
  • SARS-CoV-2 and COVID-19 Research
  • COVID-19 Clinical Research Studies
  • interferon and immune responses
  • Circular RNAs in diseases
  • Immune cells in cancer
  • RNA modifications and cancer
  • Drug Solubulity and Delivery Systems
  • Alcohol Consumption and Health Effects
  • MicroRNA in disease regulation
  • Advanced Drug Delivery Systems
  • Cytokine Signaling Pathways and Interactions
  • Diet, Metabolism, and Disease
  • Immunotherapy and Immune Responses
  • Immune Response and Inflammation
  • Blood Coagulation and Thrombosis Mechanisms
  • Cancer, Hypoxia, and Metabolism
  • Protein Tyrosine Phosphatases
  • Cardiac Ischemia and Reperfusion

Heilongjiang University of Chinese Medicine
2024-2025

West China Hospital of Sichuan University
2025

Central South University
2025

Sichuan University
2025

Hebei Medical University
2024

Huazhong University of Science and Technology
2010-2024

First Affiliated Hospital of Anhui Medical University
2024

Anhui Medical University
2024

Rockefeller University
2019-2024

Harbin Medical University
2019-2024

Paul Bastard Lindsey B. Rosen Qian Zhang Eleftherios Michailidis Hans-Heinrich Hoffmann and 95 more Yu Zhang Karim Dorgham Quentin Philippot Jérémie Rosain Vivien Béziat Jérémy Manry Elana Shaw Liis Haljasmägi Pärt Peterson Lazaro Lorenzo Lucy Bizien Sophie Trouillet‐Assant Kerry Dobbs Adriana A. de Jesus Alexandre Bélot Anne Kallaste Émilie Catherinot Yacine Tandjaoui-Lambiotte Jérémie Le Pen Gaspard Kerner Benedetta Bigio Yoann Seeleuthner Rui Yang Alexandre Bolze András N. Spaan Ottavia M. Delmonte Michael S. Abers Alessandro Aiuti Giorgio Casari Vito Lampasona Lorenzo Piemonti Fabio Ciceri Kaya Bilgüvar Richard P. Lifton Marc Vasse David M. Smadja Mélanie Migaud Jérôme Hadjadj Benjamin Terrier Darragh Duffy Lluı́s Quintana-Murci Diederik van de Beek Lucie Roussel Donald C. Vinh Stuart G. Tangye Filomeen Haerynck David Dalmau Javier Martínez‐Picado Petter Brodin Michel C. Nussenzweig Stéphanie Boisson‐Dupuis Carlos Rodríguez‐Gallego Guillaume Vogt Trine H. Mogensen Andrew J. Oler Jingwen Gu Peter D. Burbelo Jeffrey I. Cohen Andrea Biondi Laura Rachele Bettini Mariella D’Angiò Paolo Bonfanti Patrick Rossignol Julien Mayaux Frédéric Rieux‐Laucat Eystein S. Husebye Francesca Fusco Matilde Valeria Ursini Luisa Imberti Alessandra Sottini Simone Paghera Eugenia Quirós-Roldán Camillo Rossi Riccardo Castagnoli Daniela Montagna Amelia Licari Gian Luigi Marseglia Xavier Duval Jade Ghosn John S. Tsang Raphaela Goldbach‐Mansky Kai Kisand Michail S. Lionakis Anne Puel Shen‐Ying Zhang Steven M. Holland Guy Gorochov Emmanuelle Jouanguy Charles M. Rice Aurélie Cobat Luigi D. Notarangelo Laurent Abel Helen C. Su Jean‐Laurent Casanova Andrés A. Arias

Interindividual clinical variability in the course of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection is vast. We report that at least 101 987 patients with life-threatening disease 2019 (COVID-19) pneumonia had neutralizing immunoglobulin G (IgG) autoantibodies (auto-Abs) against interferon-ω (IFN-ω) (13 patients), 13 types IFN-α (36), or both (52) onset critical disease; a few also auto-Abs other three type I IFNs. The neutralize ability corresponding IFNs to block...

10.1126/science.abd4585 article EN cc-by Science 2020-09-24
Qian Zhang Paul Bastard Zhiyong Liu Jérémie Le Pen Marcela Moncada‐Vélez and 95 more Jie Chen Masato Ogishi Ira K. D. Sabli Stephanie Hodeib Cecilia B. Korol Jérémie Rosain Kaya Bilgüvar Junqiang Ye Alexandre Bolze Benedetta Bigio Rui Yang Andrés A. Arias Qinhua Zhou Yu Zhang Fanny Onodi Sarantis Korniotis Léa Karpf Quentin Philippot Marwa Chbihi Lucie Bonnet‐Madin Karim Dorgham Nikaïa Smith William M. Schneider Brandon S. Razooky Hans-Heinrich Hoffmann Eleftherios Michailidis Leen Moens Ji Eun Han Lazaro Lorenzo Lucy Bizien Philip Meade Anna‐Lena Neehus Aileen Camille Ugurbil Aurélien Corneau Gaspard Kerner Peng Zhang Franck Rapaport Yoann Seeleuthner Jérémy Manry Cécile Masson Yohann Schmitt Agatha Schlüter Tom Le Voyer Taushif Khan Juan Li Jacques Fellay Lucie Roussel Mohammad Shahrooei Mohammed F. Alosaimi Davood Mansouri Haya Al‐Saud Fahd Al‐Mulla Feras Almourfi Saleh Zaid Al-Muhsen Fahad Alsohime Saeed Al Turki Rana Hasanato Diederik van de Beek Andrea Biondi Laura Rachele Bettini Mariella D’Angiò Paolo Bonfanti Luisa Imberti Alessandra Sottini Simone Paghera Eugenia Quirós-Roldán Camillo Rossi Andrew J. Oler Miranda F. Tompkins Camille Alba Isabelle Vandernoot Jean‐Christophe Goffard Guillaume Smits Isabelle Migeotte Filomeen Haerynck Pere Soler‐Palacín Andrea Martín-Nalda Roger Colobrán Pierre‐Emmanuel Morange Sevgi Keleş Fatma Çölkesen Tayfun Özçelık Kadriye Kart Yaşar Sevtap Şenoğlu Şemsi̇ Nur Karabela Carlos Rodríguez‐Gallego Giuseppe Novelli Sami Hraiech Yacine Tandjaoui-Lambiotte Xavier Duval Cédric Laouénan Andrew L. Snow Clifton L. Dalgard Joshua D. Milner Donald C. Vinh

The genetics underlying severe COVID-19 immune system is complex and involves many genes, including those that encode cytokines known as interferons (IFNs). Individuals lack specific IFNs can be more susceptible to infectious diseases. Furthermore, the autoantibody dampens IFN response prevent damage from pathogen-induced inflammation. Two studies now examine likelihood affects risk of coronavirus disease 2019 (COVID-19) through components this (see Perspective by Beck Aksentijevich). Q....

10.1126/science.abd4570 article EN cc-by Science 2020-09-24
Paul Bastard Adrian Gervais Tom Le Voyer Jérémie Rosain Quentin Philippot and 95 more Jérémy Manry Eleftherios Michailidis Hans-Heinrich Hoffmann Shohei Eto Marina García-Prat Lucy Bizien Alba Parra-Martínez Rui Yang Liis Haljasmägi Mélanie Migaud Karita Särekannu Julia Maslovskaja Nicolas de Prost Yacine Tandjaoui-Lambiotte Charles‐Édouard Luyt Blanca Amador-Borrero Alexandre Gaudet Julien Poissy Pascal Morel Pascale Richard Fabrice Cognasse Jesús Troya Sophie Trouillet‐Assant Alexandre Bélot Kahina Saker Pierre Garçon Jacques G. Rivière Jean‐Christophe Lagier Stéphanie Gentile Lindsey B. Rosen Elana Shaw Tomohiro Morio Junko Tanaka David Dalmau Pierre‐Louis Tharaux D. Sène Alain Stépanian Bruno Mégarbane Vasiliki Triantafyllia Arnaud Fekkar James R. Heath José Luis Franco Juan‐Manuel Anaya Jordi Solé‐Violán Luisa Imberti Andrea Biondi Paolo Bonfanti Riccardo Castagnoli Ottavia M. Delmonte Yu Zhang Andrew L. Snow Steven M. Holland Catherine M. Biggs Marcela Moncada‐Vélez Andrés A. Arias Lazaro Lorenzo Soraya Boucherit Boubacar Coulibaly Dany Anglicheau Anna M. Planas Filomeen Haerynck Sotiriјa Duvlis Robert L. Nussbaum Tayfun Özçelık Sevgi Keleş Ahmed Aziz Bousfiha Jalila El Bakkouri Carolina Ramírez‐Santana Stéphane Paul Qiang Pan‐Hammarström Lennart Hammarström Annabelle Dupont Alina Kurolap Christine N. Metz Alessandro Aiuti Giorgio Casari Vito Lampasona Fabio Ciceri Lucila Akune Barreiros Elena Domínguez‐Garrido Mateus Vidigal Mayana Zatz Diederik van de Beek Sabina Sahanic Ivan Tancevski Yuriy Stepanovskyy Oksana Boyarchuk Yoko Nukui Miyuki Tsumura Loreto Vidaur Stuart G. Tangye Sonia Burrel Darragh Duffy Lluı́s Quintana-Murci Adam Klocperk

Circulating autoantibodies (auto-Abs) neutralizing high concentrations (10 ng/mL, in plasma diluted 1 to 10) of IFN-α and/or -ω are found about 10% patients with critical COVID-19 pneumonia, but not subjects asymptomatic infections. We detect auto-Abs 100-fold lower, more physiological, (100 pg/mL, 1/10 dilutions plasma) 13.6% 3,595 COVID-19, including 21% 374 > 80 years, and 6.5% 522 severe COVID-19. These antibodies also detected 18% the 1,124 deceased (aged 20 days-99 years; mean: 70...

10.1126/sciimmunol.abl4340 article EN cc-by Science Immunology 2021-08-10

Abstract Background Increasing studies have shown that circRNA is closely related to the carcinogenesis and development of many cancers. However, biological functions underlying molecular mechanism circRNAs in triple-negative breast cancer (TNBC) remain largely unclear so far. Methods Here, we investigated expression pattern four pairs TNBC tissues paracancerous normal using RNA-sequencing. The prognostic significance circSEPT9 were evaluated with qRT-PCR situ hybridization two cohorts....

10.1186/s12943-020-01183-9 article EN cc-by Molecular Cancer 2020-04-07

Yellow fever virus (YFV) live attenuated vaccine can, in rare cases, cause life-threatening disease, typically patients with no previous history of severe viral illness. Autosomal recessive (AR) complete IFNAR1 deficiency was reported one 12-yr-old patient. Here, we studied seven other previously healthy aged 13 to 80 yr unexplained YFV vaccine–associated disease. One 13-yr-old patient had AR IFNAR2 deficiency. Three vaccinated at the ages 47, 57, and 64 high titers circulating auto-Abs...

10.1084/jem.20202486 article EN cc-by-nc-sa The Journal of Experimental Medicine 2021-02-05
Jérémy Manry Paul Bastard Adrian Gervais Tom Le Voyer Jérémie Rosain and 95 more Quentin Philippot Eleftherios Michailidis Hans-Heinrich Hoffmann Shohei Eto Marina García-Prat Lucy Bizien Alba Parra-Martínez Rui Yang Liis Haljasmägi Mélanie Migaud Karita Särekannu Julia Maslovskaja Nicolas de Prost Yacine Tandjaoui-Lambiotte Charles‐Édouard Luyt Blanca Amador-Borrero Alexandre Gaudet Julien Poissy Pascal Morel Pascale Richard Fabrice Cognasse Jesús Troya Sophie Trouillet‐Assant Alexandre Bélot Kahina Saker Pierre Garçon Jacques G. Rivière Jean‐Christophe Lagier Stéphanie Gentile Lindsey B. Rosen Elana Shaw Tomohiro Morio Junko Tanaka David Dalmau Pierre‐Louis Tharaux D. Sène Alain Stépanian Bruno Mégarbane Vasiliki Triantafyllia Arnaud Fekkar James R. Heath José Luis Franco Juan‐Manuel Anaya Jordi Solé‐Violán Luisa Imberti Andrea Biondi Paolo Bonfanti Riccardo Castagnoli Ottavia M. Delmonte Yu Zhang Andrew L. Snow Steven M. Holland Catherine M. Biggs Marcela Moncada‐Vélez Andrés A. Arias Lazaro Lorenzo Soraya Boucherit Dany Anglicheau Anna M. Planas Filomeen Haerynck Sotiriјa Duvlis Tayfun Özçelık Sevgi Keleş Ahmed Aziz Bousfiha Jalila El Bakkouri Carolina Ramírez‐Santana Stéphane Paul Qiang Pan‐Hammarström Lennart Hammarström Annabelle Dupont Alina Kurolap Christine N. Metz Alessandro Aiuti Giorgio Casari Vito Lampasona Fabio Ciceri Lucila Akune Barreiros Elena Domínguez‐Garrido Mateus Vidigal Mayana Zatz Diederik van de Beek Sabina Sahanic Ivan Tancevski Yuriy Stepanovskyy Oksana Boyarchuk Yoko Nukui Miyuki Tsumura Loreto Vidaur Stuart G. Tangye Sonia Burrel Darragh Duffy Lluı́s Quintana-Murci Adam Klocperk Nelli Y. Kann Anna Shcherbina

Significance There is growing evidence that preexisting autoantibodies neutralizing type I interferons (IFNs) are strong determinants of life-threatening COVID-19 pneumonia. It important to estimate their quantitative impact on mortality upon SARS-CoV-2 infection, by age and sex, as both the prevalence these risk death increase with higher in men. Using an unvaccinated sample 1,261 deceased patients 34,159 individuals from general population, we found against IFNs strongly increased...

10.1073/pnas.2200413119 article EN cc-by Proceedings of the National Academy of Sciences 2022-05-16

Inborn errors of human IFN-γ-dependent macrophagic immunity underlie mycobacterial diseases, whereas inborn IFN-α/β-dependent intrinsic viral diseases. Both types IFNs induce the transcription factor IRF1. We describe unrelated children with inherited complete IRF1 deficiency and early-onset, multiple, life-threatening diseases caused by weakly virulent mycobacteria related intramacrophagic pathogens. These have no history severe disease, despite exposure to many viruses, including...

10.1016/j.cell.2022.12.038 article EN cc-by Cell 2023-02-01

Patients with autosomal recessive (AR) IL-12p40 or IL-12Rβ1 deficiency display Mendelian susceptibility to mycobacterial disease (MSMD) due impaired IFN-γ production and, less commonly, chronic mucocutaneous candidiasis (CMC) IL-17A/F production. We report six patients from four kindreds AR IL-23R deficiency. These are homozygous for one of different loss-of-function IL23R variants. All have a history MSMD, but only two suffered CMC. show that IL-23 induces IL-17A in MAIT cells, possibly...

10.1126/sciimmunol.abq5204 article EN Science Immunology 2023-02-03

IL-6 is known to contribute the differentiation of CD4+ T cells into different subsets effector helper cells. Less about potential in regulating CD8+ cell function. Here, we identify as a master regulator IL-21 promotes subset naive that express IL-6R unique population characterized by production high levels and low IFN-γ. Similar follicular (Tfh) cells, IL-21–producing generated presence directly provide help B induce isotype switching. cell–derived contributes protective virus-specific IgG...

10.1084/jem.20160417 article EN The Journal of Experimental Medicine 2016-09-26

Mendelian susceptibility to mycobacterial disease (MSMD) is characterized by a selective predisposition clinical caused the Bacille Calmette-Guérin (BCG) vaccine and environmental mycobacteria. The known genetic etiologies of MSMD are inborn errors IFN-γ immunity due mutations 15 genes controlling production or response IFN-γ. Since first MSMD-causing were reported in 1996, biallelic encoding receptor 1 (IFN-γR1) IFN-γR2 have been many patients diverse ancestries. Surprisingly, gene cytokine...

10.1172/jci135460 article EN Journal of Clinical Investigation 2020-03-12

Significance Only ∼5% of individuals infected with Mycobacterium tuberculosis develop clinical TB in their lifetime. We previously reported that homozygosity for the P1104A variant TYK2 gene, found ∼1/600 Europeans and ∼1/5,000 from elsewhere (except East Asians sub-Saharan Africans), was a monogenic etiology genetically heterogeneous cohort patients non-European countries endemic TB. Making use UK Biobank cohort, we report strong enrichment homozygotes British sample 620 (1%), relative to...

10.1073/pnas.1903561116 article EN Proceedings of the National Academy of Sciences 2019-05-08

Protein kinase B (PKB/Akt) plays important roles in the regulation of lipid homeostasis, and impairment Akt activity has been demonstrated to be involved development non-alcoholic fatty liver disease (NAFLD). Previous studies suggest that cytochrome P4502E1 (CYP2E1) causal pathogenesis alcoholic (AFL). We hypothesized might impaired due CYP2E1-induced oxidative stress chronic ethanol-induced hepatic steatosis. In this study, we found steatosis was accompanied with reduced phosphorylation at...

10.1016/j.redox.2017.09.018 article EN cc-by-nc-nd Redox Biology 2017-09-28

Human inborn errors of IFN-γ underlie mycobacterial disease, due to insufficient production by lymphoid cells, impaired myeloid cell responses this cytokine, or both. We report four patients from two unrelated kindreds with intermittent monocytosis and including bacillus Calmette-Guérin-osis disseminated tuberculosis, without any known error IFN-γ. The are homozygous for ZNFX1 variants (p.S959* p.E1606Rfs*10) predicted be loss function (pLOF). There no subjects pLOF in public databases. is a...

10.1073/pnas.2102804118 article EN Proceedings of the National Academy of Sciences 2021-04-05

High-level expression of the transcription factor T-bet characterizes a phenotypically distinct murine B cell population known as “age-associated cells” (ABCs). T-bet–deficient mice have reduced ABCs and impaired humoral immunity. We describe patient with inherited deficiency largely normal immunity including intact somatic hypermutation, affinity maturation memory formation in vivo, differentiation into Ig-producing plasmablasts vitro. Nevertheless, exhibited skewed class switching to IgG1,...

10.1126/sciimmunol.abq3277 article EN Science Immunology 2022-07-22

The molecular basis of interindividual clinical variability upon infection with Staphylococcus aureus is unclear. We describe patients haploinsufficiency for the linear deubiquitinase OTULIN, encoded by a gene on chromosome 5p. Patients suffer from episodes life-threatening necrosis, typically triggered S. infection. disorder phenocopied in 5p- (Cri-du-Chat) chromosomal deletion syndrome. OTULIN causes an accumulation ubiquitin dermal fibroblasts, but tumor necrosis factor receptor-mediated...

10.1126/science.abm6380 article EN Science 2022-05-19

Human cells homozygous for rare loss-of-expression (LOE) TYK2 alleles have impaired, but not abolished, cellular responses to IFN-α/β (underlying viral diseases in the patients) and IL-12 IL-23 mycobacterial diseases). Cells common P1104A allele selectively impaired isolated disease). We report three new forms of deficiency six patients from five families (R864C, G996R, G634E, or G1010D) compound heterozygous a (A928V). All these missense encode detectable proteins. The R864C G1010D are...

10.1084/jem.20220094 article EN cc-by The Journal of Experimental Medicine 2022-09-12

Ventilator-induced lung injury (VILI) is caused by overdistension of the alveoli repetitive recruitment and derecruitment alveolar units. This study aims to investigate potential role mechanism fibroblast growth factor 21 (FGF21), a metabolic regulator secreted liver, in VILI development.Serum FGF21 concentrations were determined patients undergoing mechanical ventilation during general anesthesia mouse model. Lung was compared between FGF21-knockout (KO) mice wild-type (WT) mice....

10.1186/s13054-023-04488-5 article EN cc-by Critical Care 2023-05-22

Severe defects in human IFNγ immunity predispose individuals to both Bacillus Calmette-Guérin disease and tuberculosis, whereas milder only tuberculosis

10.1038/s41586-024-07866-3 article EN cc-by Nature 2024-08-28
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