Mari K. Halle

ORCID: 0000-0002-2660-8271
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About
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Research Areas
  • Endometrial and Cervical Cancer Treatments
  • Ovarian cancer diagnosis and treatment
  • Cancer-related molecular mechanisms research
  • Cancer Genomics and Diagnostics
  • Cervical Cancer and HPV Research
  • Radiomics and Machine Learning in Medical Imaging
  • Reproductive System and Pregnancy
  • Circular RNAs in diseases
  • MRI in cancer diagnosis
  • Epigenetics and DNA Methylation
  • Endometriosis Research and Treatment
  • 14-3-3 protein interactions
  • Estrogen and related hormone effects
  • RNA Research and Splicing
  • Angiogenesis and VEGF in Cancer
  • Cytokine Signaling Pathways and Interactions
  • Genetic factors in colorectal cancer
  • RNA modifications and cancer
  • MicroRNA in disease regulation
  • Sex and Gender in Healthcare
  • Lung Cancer Treatments and Mutations
  • Cancer, Hypoxia, and Metabolism
  • Cancer Cells and Metastasis
  • Lung Cancer Research Studies
  • Sarcoma Diagnosis and Treatment

Haukeland University Hospital
2016-2025

University of Bergen
2016-2025

University of Alabama at Birmingham
2021

Norwegian University of Life Sciences
2014

Mayo Clinic
2013

Brigham and Women's Hospital
2013

Radboud University Medical Center
2013

Radboud University Nijmegen
2013

Harvard University
2013

Moffitt Cancer Center
2013

Paul D.P. Pharoah Ya-Yu Tsai Susan J. Ramus Catherine M. Phelan Ellen L. Goode and 95 more Kate Lawrenson Melissa A. Buckley Brooke L. Fridley Jonathan P. Tyrer Howard C. Shen Rachel Palmieri Weber Rod Karevan Melissa C. Larson Honglin Song Daniel C. Tessier François Bacot Daniel Vincent Julie M. Cunningham Joe Dennis Ed Dicks Katja K.H. Aben Hoda Anton‐Culver Natalia Antonenkova Sebastian M. Armasu Laura Baglietto Elisa V. Bandera Matthias W. Beckmann Michael J. Birrer Greg Bloom Natalia Bogdanova James D. Brenton Louise A. Brinton Angela Brooks‐Wilson Robert Brown Ralf Bützow Ian Campbell Michael E. Carney Renato S. Carvalho Jenny Chang‐Claude Y Anne Chen Zhihua Chen Wong‐Ho Chow Mine Cicek Gerhard A. Coetzee Linda S. Cook Daniel W. Cramer Cezary Cybulski Agnieszka Dansonka‐Mieszkowska Evelyn Despierre Jennifer A. Doherty Thilo Dörk Andreas du Bois Matthias Dürst Diana Eccles Robert P. Edwards Arif B. Ekici Peter A. Fasching David Fenstermacher James M. Flanagan Yu-Tang Gao Montserrat García‐Closas Aleksandra Gentry‐Maharaj Graham G. Giles Anxhela Gjyshi Martin Gore Jacek Gronwald Qi Guo Mari K. Halle Philipp Harter Alexander Hein Florian Heitz Peter Hillemanns Maureen E. Hoatlin Estrid Høgdall Claus Høgdall Satoyo Hosono Anna Jakubowska Allan Jensen Kimberly R. Kalli Beth Y. Karlan Linda E. Kelemen Lambertus A. Kiemeney Susanne K. Kjær Gottfried E. Konecny Camilla Krakstad Jolanta Kupryjańczyk Diether Lambrechts Sandrina Lambrechts Nhu D. Le Nathan Lee Janet Lee Arto Leminen Boon Kiong Lim Jolanta Lissowska Jan Lubiński Lene Lundvall Galina Lurie Leon F.A.G. Massuger Keitaro Matsuo Valerie McGuire

10.1038/ng.2564 article EN Nature Genetics 2013-03-27
Jennifer Permuth‐Wey Kate Lawrenson Howard C. Shen Aneliya Velkova Jonathan P. Tyrer and 95 more Zhihua Chen Hui‐Yi Lin Y. Ann Chen Ya-Yu Tsai Xiaotao Qu Susan J. Ramus Rod Karevan Janet Lee Nathan Lee Melissa C. Larson Katja K.H. Aben Hoda Anton‐Culver Natalia Antonenkova Antonis C. Antoniou Sebastian M. Armasu François Bacot Laura Baglietto Elisa V. Bandera Jill S. Barnholtz‐Sloan Matthias W. Beckmann Michael J. Birrer Greg Bloom Natalia Bogdanova Louise A. Brinton Angela Brooks‐Wilson Robert Brown Ralf Bützow Qiuyin Cai Ian Campbell Jenny Chang‐Claude Stephen J. Chanock Georgia Chenevix‐Trench Jin Q. Cheng Mine S. Cicek Gerhard A. Coetzee Linda S. Cook Fergus J. Couch Daniel W. Cramer Julie M. Cunningham Agnieszka Dansonka‐Mieszkowska Evelyn Despierre Jennifer A. Doherty Thilo Dörk Andreas du Bois Matthias Dürst Douglas F. Easton Diana Eccles Robert P. Edwards Arif B. Ekici Peter A. Fasching David Fenstermacher James M. Flanagan Montserrat García‐Closas Aleksandra Gentry‐Maharaj Graham G. Giles Rosalind Glasspool Jesús González Bosquet Marc T. Goodman Martin Gore Bohdan Górski Jacek Gronwald Per Hall Mari K. Halle Philipp Harter Florian Heitz Peter Hillemanns Maureen E. Hoatlin Claus Høgdall Estrid Høgdall Satoyo Hosono Anna Jakubowska Allan Jensen Heather Jim Kimberly R. Kalli Beth Y. Karlan Stanley B. Kaye Linda E. Kelemen Lambertus A. Kiemeney Fumitaka Kikkawa Gottfried E. Konecny Camilla Krakstad Susanne K. Kjær Jolanta Kupryjańczyk Diether Lambrechts Sandrina Lambrechts Johnathan M. Lancaster Nhu D. Le Arto Leminen Douglas A. Levine Dong Liang Boon Kiong Lim Jie Lin Jolanta Lissowska Karen H. Lu Jan Lubiński

Epithelial ovarian cancer (EOC) has a heritable component that remains to be fully characterized. Most identified common susceptibility variants lie in non-protein-coding sequences. We hypothesized the 3′ untranslated region at putative microRNA (miRNA)-binding sites represent functional targets influence EOC susceptibility. Here, we evaluate association between 767 miRNA-related single-nucleotide polymorphisms (miRSNPs) and risk 18,174 cases 26,134 controls from 43 studies genotyped through...

10.1038/ncomms2613 article EN cc-by-nc-nd Nature Communications 2013-03-27

Despite successful implementation of drugs targeting the human epidermal growth factor receptor 2 (HER2) in breast and gastric cancers, potential HER2 as a therapeutic target other cancers has been less studied, including endometrial cancer. We investigated expression levels (ERBB2) large cohort cancer lesions, also complex atypical hyperplasia metastatic lesions. 67 precursor 790 primary 383 lesions were for relation to clinicopathologic features outcome. Protein assessed by...

10.1038/bjc.2017.422 article EN cc-by-nc-sa British Journal of Cancer 2017-11-23

// Ingvild Løberg Tangen 1, 2 , Therese Bredholt Onyango Reidun Kopperud Anna Berg Mari K. Halle Anne M. Øyan 3, 4 Henrica M.J. Werner Jone Trovik Karl Henning Kalland Helga B. Salvesen 2, * Camilla Krakstad 5, 1 Centre for Cancer Biomarkers, Department of Clinical Science, University Bergen, Norway Gynecology and Obstetrics, Haukeland Hospital, 3 Medicine, Microbiology, 5 Biomedicine, These authors contributed equally to this work Correspondence to: Krakstad, email:...

10.18632/oncotarget.10334 article EN Oncotarget 2016-06-30

// Anna Berg 1,2 , Erling A. Hoivik Siv Mjøs Frederik Holst Henrica M. J. Werner Ingvild L. Tangen Amaro Taylor-Weiner 7,8,9 William Gibson Kanthida Kusonmano 1,2,3 Elisabeth Wik 4,5 Jone Trovik Mari K. Halle Anne Øyan 1,6 Karl-Henning Kalland Andrew D. Cherniack 7 Rameen Beroukhim Ingunn Stefansson Gordon B. Mills 10 Camilla Krakstad and Helga Salvesen 1,2* 1 Department of Clinical Science, Center for Cancer Biomarkers, University Bergen, Norway 2 Gynecology Obstetrics,...

10.18632/oncotarget.2675 article EN Oncotarget 2014-11-04

Recent identification of a specific role HSF1 in cancer progression has led to new relevance as both prognostic and predictive marker. The endometrial so far been unexplored. A total 823 lesions from carcinoma precursors, primary tumours metastases were prospectively collected explored for protein expression relation established markers aggressive disease survival. Transcriptional alterations related level investigated by microarray analysis 224 freshly frozen samples parallel. High is...

10.1038/bjc.2014.262 article EN cc-by-nc-sa British Journal of Cancer 2014-05-22

PD-L1 and PD-1 are predictive markers for immunotherapy increasingly relevant in endometrial cancer. The reported fraction of positive primary tumors has been inconsistent. We investigated the expression tumors, also stratified by MSI. As is foremost metastatic disease, was assessed corresponding lesions.PD-L1 a prospective, population based cancer cohort 700 patients with lesions from 68 74 respectively. Fresh tissue used gene analysis.In expressed 59% 63%, respectively, but no impact on...

10.1016/j.ygyno.2020.01.020 article EN cc-by-nc-nd Gynecologic Oncology 2020-01-21

Human papillomavirus (HPV)-associated cervical cancer is a leading cause of deaths in women. Here we present an integrated multi-omic analysis 643 squamous cell carcinomas (CSCC, the most common histological variant cancer), representing patient populations from USA, Europe and Sub-Saharan Africa identify two CSCC subtypes (C1 C2) with differing prognosis. C1 C2 tumours can be driven by either HPV types (16 18) while HPV16 HPV18 are overrepresented among respectively, prognostic difference...

10.1038/s41467-022-33544-x article EN cc-by Nature Communications 2022-10-07

High-grade neuroendocrine cervical cancers (NETc) are exceedingly rare, highly aggressive tumors. We analyzed 64 NETc tumor samples by whole-exome sequencing (WES). Human papillomavirus DNA was detected in 65.6% (42/64) of the Recurrent mutations were identified PIK3CA, KMT2D/MLL2, K-RAS, ARID1A, NOTCH2, and RPL10. The top mutated genes included RB1, PTEN, KMT2D / MLL2, WDFY3, a gene not yet implicated NETc. Somatic CNV analysis two copy number gains (3q27.1 19q13.12) five losses...

10.1073/pnas.2321898121 article EN Proceedings of the National Academy of Sciences 2024-04-16

Abstract Background Effective diagnostic tools for prompt identification of high-risk locally advanced cervical cancer (LACC) patients are needed to facilitate early, individualized treatment. The aim this work was assess temporal changes in tumor radiomics (delta radiomics) from T2-weighted imaging (T2WI) during concurrent chemoradiotherapy (CCRT) LACC patients, and their association with progression-free survival (PFS). Furthermore, develop, validate, compare delta- pretreatment radiomic...

10.1186/s12885-025-13509-1 article EN cc-by BMC Cancer 2025-01-22

Abstract Pelvic MRI is essential for evaluating local and regional tumor extent in uterine cervical cancer (CC). Tumor microstructure captured by diffusion-weighted imaging (DWI) apparent diffusion coefficient (ADC) markers may be closely linked to prognosis CC. Purpose To explore whether primary ADC predict survival Material methods CC patients ( n = 179) diagnosed during 2009–2020 with MRI-assessed maximum size ≥ 2 cm were included this retrospective single-center study. Two radiologists...

10.1186/s40644-025-00828-6 article EN cc-by Cancer Imaging 2025-02-28

// Camilla Krakstad 1,2 , Ingvild L. Tangen Erling A. Hoivik Mari K. Halle Anna Berg Henrica M. Werner Maria B. Ræder Kanthida Kusonmano 1,2,3 June X. Zou 4 Anne Øyan 5,6 Ingunn Stefansson 5,7 Jone Trovik Karl-Henning Kalland Hong-Wu Chen and Helga Salvesen 1 Centre for Cancer Biomarkers, Department of Clinical Science, University Bergen, Bergen, Norway 2 Gynecology Obstetrics, Haukeland Hospital, 3 Computational Biology Unit, Internal Medicine Biochemistry Molecular...

10.18632/oncotarget.4955 article EN Oncotarget 2015-07-22

Uterine cervical cancer (CC) is the most common gynecologic malignancy worldwide. Whole-volume radiomic profiling from pelvic MRI may yield prognostic markers for tailoring treatment in CC. However, relies on manual tumor segmentation which unfeasible clinic. We present a fully automatic method 3D of primary CC lesions using state-of-the-art deep learning (DL) techniques. In 131 patients, was manually segmented T2-weighted by two radiologists (R1, R2). Patients were separated into...

10.3390/cancers14102372 article EN Cancers 2022-05-11

Cancers arise through accumulating genetic and epigenetic alterations, considered relevant for phenotype approaches to targeting new therapies. We investigated a unique collection of endometrial cancer precursor samples clinically annotated primary metastatic lesions two evolutionary functionally related transcription factors, CCCTC-binding factor (zinc finger protein) (CTCF) its paralogue CTCF-like factor, also denoted Brother the Regulator Imprinted Sites (CTCFL/BORIS). CTCF, chromatin...

10.18632/oncotarget.1697 article EN Oncotarget 2014-01-28

Stathmin is a prognostic marker in many cancers, including endometrial cancer. Preclinical studies, predominantly breast cancer, have suggested that stathmin may additionally be predictive for response to paclitaxel. We first evaluated the paclitaxel cancer cell lines before and after knock-down. Subsequently we investigated clinical containing chemotherapy metastatic relation protein level tumors. was also determined lesions, analyzing changes biomarker status on disease progression....

10.1371/journal.pone.0090141 article EN cc-by PLoS ONE 2014-02-25

// Anna Berg 1, 2 , Kristine E. Fasmer 3 Karen K. Mauland Sigmund Ytre-Hauge 3, 4 Erling A. Hoivik Jenny Husby Ingvild L. Tangen Jone Trovik Mari Halle Kathrine Woie Line Bjørge Atle Bjørnerud 5, 6 Helga B. Salvesen Henrica M. J. Werner Camilla Krakstad 2, 7, * Ingfrid S. Haldorsen 4, 1 Center for Cancer Biomarkers, Department of Clinical Science, University Bergen, Norway Gynecology and Obstetrics, Haukeland Hospital, Radiology, Section Medicine, 5 Physics, Oslo, The...

10.18632/oncotarget.12004 article EN Oncotarget 2016-09-13

Abstract Prognostication is critical for accurate diagnosis and tailored treatment in endometrial cancer (EC). We employed radiogenomics to integrate preoperative magnetic resonance imaging (MRI, n = 487 patients) with histologic-, transcriptomic- molecular biomarkers ( 550 aiming identify aggressive tumor features a study including 866 EC patients. Whole-volume radiomic profiling from manually (radiologists) segmented tumors 138 yielded clusters identifying patients high-risk histological...

10.1038/s42003-021-02894-5 article EN cc-by Communications Biology 2021-12-06

Advanced cervical cancer carries a particularly poor prognosis, and few treatment options exist. Identification of effective molecular markers is vital to improve the individualisation treatment. We investigated transcriptional data from carcinomas related patient survival recurrence identify potential drivers for aggressive disease.Primary tumour RNA-sequencing profiles 20 patients with 53 cured disease were compared. Protein levels prognostic impact selected identified by...

10.1038/s41416-021-01305-0 article EN cc-by British Journal of Cancer 2021-03-15

Background Despite being the most common pelvic gynecologic malignancy in industrialized countries, no targeted therapies are available for patients with metastatic endometrial carcinoma. In order to improve treatment, underlying molecular characteristics of primary and disease must be explored. Methodology/Principal Findings We utilized mass spectrometric-based mutation detection technology OncoMap define types frequency point somatic mutations cancer. 67 tumors, 15 metastases corresponding...

10.1371/journal.pone.0052795 article EN cc-by PLoS ONE 2012-12-27

Abstract Background: Genome-wide association studies (GWAS) have identified more than 100 genetic loci for various cancers. However, only one is endometrial cancer. Methods: We conducted a three-stage GWAS including 8,492 cancer cases and 16,596 controls. After analyzing 585,963 single-nucleotide polymorphisms (SNP) in 832 2,682 controls (stage I) from the Shanghai Endometrial Cancer Genetics Study, we selected top 106 SNPs silico replication among 1,265 5,190 Australian/British II). Nine...

10.1158/1055-9965.epi-11-1160 article EN Cancer Epidemiology Biomarkers & Prevention 2012-06-01
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